Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS03185 and ABZR87_RS03190 are separated by 272 nucleotidesABZR87_RS03190 and ABZR87_RS03195 are separated by 9 nucleotidesABZR87_RS03195 and ABZR87_RS03200 are separated by 238 nucleotidesABZR87_RS03200 and ABZR87_RS03205 are separated by 4 nucleotides ABZR87_RS03185: ABZR87_RS03185 - hypothetical protein, at 668,865 to 669,074 _RS03185 ABZR87_RS03190: ABZR87_RS03190 - hypothetical protein, at 669,347 to 670,561 _RS03190 ABZR87_RS03195: ABZR87_RS03195 - cation diffusion facilitator family transporter, at 670,571 to 671,719 _RS03195 ABZR87_RS03200: ABZR87_RS03200 - response regulator transcription factor, at 671,958 to 672,623 _RS03200 ABZR87_RS03205: ABZR87_RS03205 - transporter substrate-binding domain-containing protein, at 672,628 to 676,935 _RS03205
Group Condition ABZR87_RS03185 ABZR87_RS03190 ABZR87_RS03195 ABZR87_RS03200 ABZR87_RS03205
carbon source Heptanoic (C) -0.7 -0.2 -0.9 +0.3 +0.1
carbon source propionate (C) +0.1 -0.2 -1.4 +0.0 +0.1
soil soil EcoFAB sample 2; outgrowth in LB -0.6 -0.1 -0.5 -0.1 -0.1
carbon source propionate (C) +0.2 -0.1 -1.7 +0.3 +0.1
carbon source Heptanoic (C) -0.5 -0.1 -0.9 +0.3 +0.1
carbon source Pimelic (C) -0.0 -0.1 -1.1 +0.1 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.0 -0.1 -1.0 +0.1
root root sample 5; outgrowth in LB -0.7 +0.3 -0.3 -0.3 -0.1
carbon source Octanoic (C) -0.1 -0.3 -0.5 -0.1 +0.2
carbon source D-Glucose (C) +0.4 -0.1 -1.4 +0.1 +0.1
carbon source adipate (C) +0.4 -0.2 -0.9 -0.2 +0.0
carbon source Pimelic (C) +0.2 -0.1 -1.1 +0.2 +0.1
carbon source D-Glucose (C) +0.4 -0.0 -1.2 +0.1 +0.1
carbon source Suberic (C) +0.6 -0.2 -1.2 +0.1 +0.0
rhizosphere rhizosphere sample 4; outgrowth in LB -0.7 +0.0 +0.2 -0.2 +0.0
carbon source butyrate (C) +0.4 -0.0 -1.2 +0.2 +0.0
carbon source butyrate (C) +0.3 -0.1 -1.0 +0.2 +0.1
carbon source adipate (C) +0.5 -0.1 -1.0 +0.1 -0.0
carbon source Protocatechuic Acid (C) +0.2 -0.0 -1.1 +0.4 +0.0
nitrogen source nitrogen source nitrite 0.5mM -0.7 -0.1 -0.1 +0.7 -0.1
soil soil EcoFAB sample 1; outgrowth in LB +0.5 -0.0 -0.1 -0.6 -0.1
carbon source Azelaic (C) +0.5 -0.1 -0.6 -0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.2 -0.2 +0.7 +0.1
carbon source Protocatechuic Acid (C) +0.5 +0.0 -0.8 +0.6 +0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.1 -0.3 +1.0 +0.1
carbon source Dodecandioic (C) +0.5 -0.0 -0.2 +0.4 +0.1
phage Ra1_0.1 -0.5 +0.1 +0.2 +0.8 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.2 -0.2 +0.5 +0.0
carbon source acetate (C) +0.7 -0.1 -0.0 +0.3 +0.1
root root sample 6; outgrowth in LB -0.1 +0.1 +0.1 +0.6 +0.4
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ABZR87_RS03185
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ABZR87_RS03190
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ABZR87_RS03200
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