Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS02655 and ABZR87_RS02660 are separated by 8 nucleotidesABZR87_RS02660 and ABZR87_RS02665 are separated by 25 nucleotidesABZR87_RS02665 and ABZR87_RS02670 are separated by 108 nucleotidesABZR87_RS02670 and ABZR87_RS02675 are separated by 7 nucleotides ABZR87_RS02655: ABZR87_RS02655 - anti-sigma factor, at 564,484 to 565,344 _RS02655 ABZR87_RS02660: ABZR87_RS02660 - RNA polymerase sigma factor, at 565,353 to 565,934 _RS02660 ABZR87_RS02665: ABZR87_RS02665 - ATP-binding protein, at 565,960 to 566,388 _RS02665 ABZR87_RS02670: ABZR87_RS02670 - c-type cytochrome biogenesis protein CcsB, at 566,497 to 567,684 _RS02670 ABZR87_RS02675: ABZR87_RS02675 - cytochrome c biogenesis protein ResB, at 567,692 to 569,899 _RS02675
Group Condition ABZR87_RS02655 ABZR87_RS02660 ABZR87_RS02665 ABZR87_RS02670 ABZR87_RS02675
soil soil EcoFAB sample 1; outgrowth in LB -7.3 -0.6 -1.7 N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB -7.5 -0.9 +0.1 N.D. N.D.
root root EcoFAB sample 1; outgrowth in LB -6.7 -0.2 -0.8 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -6.7 -0.5 -0.3 N.D. N.D.
carbon source Lauric (C) -6.3 -0.6 -0.1 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -4.5 -1.4 -0.8 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -5.8 -0.3 -0.3 N.D. N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -5.8 +0.2 -0.5 N.D. N.D.
carbon source Heptanoic (C) -5.4 -0.5 -0.0 N.D. N.D.
root root EcoFAB sample 2; outgrowth in LB -5.3 -0.3 +0.1 N.D. N.D.
carbon source Octanoic (C) -4.4 -0.5 -0.5 N.D. N.D.
carbon source Heptanoic (C) -4.7 -0.3 -0.0 N.D. N.D.
root root sample 6; outgrowth in LB -4.0 -0.4 -0.3 N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -4.2 -0.3 -0.1 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -4.2 +0.1 -0.3 N.D. N.D.
carbon source Protocatechuic Acid (C) -3.5 -0.2 -0.2 N.D. N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -3.0 -0.5 -0.3 N.D. N.D.
carbon source Octanoic (C) -4.8 +0.6 +0.4 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -3.8 +0.2 -0.2 N.D. N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -3.5 -0.4 +0.3 N.D. N.D.
carbon source Pimelic (C) -3.4 -0.2 +0.0 N.D. N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB -3.2 +0.1 -0.2 N.D. N.D.
carbon source Pimelic (C) -3.2 +0.2 -0.2 N.D. N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB -3.4 -0.1 +0.2 N.D. N.D.
carbon source Beta-alanine (C) -3.1 +0.3 -0.2 N.D. N.D.
root root sample 5; outgrowth in LB -3.2 +0.4 +0.3 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.6 -0.2 +0.4 N.D. N.D.
root root sample 4; outgrowth in LB -2.9 +0.5 +0.2 N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 -2.7 +0.5 +0.2 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -3.0 +0.3 +0.7 N.D. N.D.
remove
ABZR87_RS02655
plot		 remove
ABZR87_RS02660
plot		 remove
ABZR87_RS02665		 remove
ABZR87_RS02670
plot		 remove
ABZR87_RS02675
plot