Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS02595	ABZR87_RS02600	ABZR87_RS02605	ABZR87_RS02610	ABZR87_RS02615
root	root sample 5; outgrowth in LB	-3.3	-0.8	-1.4	-1.4	-1.1
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-5.8	-0.5	-0.5	-0.4	-0.5
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-5.2	-0.4	-0.8	-0.5	-0.6
carbon source	D-Glucose (C)	-6.9	-0.0	+0.1	-0.0	-0.1
carbon source	D-Galactose (C)	-6.6	+0.0	-0.1	+0.1	+0.2
nitrogen source	nitrogen source Ammonium chloride 20mM	-6.9	+0.2	+0.3	+0.1	-0.1
carbon source	D-Glucose (C)	-6.2	+0.1	-0.1	-0.0	-0.2
nitrogen source	nitrogen source nitrate 20mM	-6.4	+0.1	+0.0	+0.0	-0.1
carbon source	Pimelic (C)	-6.5	-0.0	+0.1	+0.0	+0.1
carbon source	Beta-alanine (C)	-6.3	+0.0	+0.1	+0.1	+0.0
carbon source	D-Galactose (C)	-6.1	+0.0	+0.0	+0.1	-0.1
carbon source	adipate (C)	-5.7	+0.0	-0.2	-0.0	-0.1
carbon source	D-Glucose (C)	-6.0	-0.0	+0.1	-0.0	-0.1
carbon source	Sebacic (C)	-5.7	+0.0	+0.1	-0.1	-0.3
carbon source	propionate (C)	-6.0	-0.1	+0.2	-0.0	+0.0
carbon source	Carbon source D-Glucose 10 mM	-6.1	+0.1	-0.0	-0.0	+0.2
carbon source	Sebacic (C)	-5.1	+0.1	+0.1	-0.6	-0.2
carbon source	Trans-2-methyl-2-butenoic (C)	-5.6	-0.1	+0.1	-0.2	+0.1
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-6.2	+0.2	+0.3	+0.2	+0.0
nitrogen source	nitrogen source nitrate 5mM	-5.4	+0.1	+0.1	+0.2	-0.2
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-4.7	+0.5	+0.5	+0.4	+0.2
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-5.5	+1.4	+1.3	+1.4	+1.2
soil	soil EcoFAB sample 1; outgrowth in LB	-5.0	+1.5	+1.2	+1.5	+1.3
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-4.6	+1.5	+1.6	+1.6	+1.3
soil	soil EcoFAB sample 2; outgrowth in LB	-3.9	+1.6	+1.6	+1.5	+1.3
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-5.9	+2.0	+1.8	+2.3	+2.0
phage	Ra1_0.01	+0.0	+2.1	+2.0	+2.1	+2.3
phage	Ra3_0.1	-0.1	+2.4	+2.4	+2.5	+2.5
phage	Ra3_1	-0.3	+6.2	+6.1	+6.3	+6.2
phage	Ra1_0.1	-0.0	+6.3	+6.1	+6.2	+6.4