Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS02490 and ABZR87_RS02495 overlap by 4 nucleotidesABZR87_RS02495 and ABZR87_RS02500 are separated by 16 nucleotidesABZR87_RS02500 and ABZR87_RS02505 overlap by 4 nucleotidesABZR87_RS02505 and ABZR87_RS02510 are separated by 19 nucleotides ABZR87_RS02490: ABZR87_RS02490 - imidazoleglycerol-phosphate dehydratase HisB, at 528,163 to 528,753 _RS02490 ABZR87_RS02495: ABZR87_RS02495 - histidinol-phosphate transaminase, at 528,750 to 529,874 _RS02495 ABZR87_RS02500: ABZR87_RS02500 - histidinol dehydrogenase, at 529,891 to 531,219 _RS02500 ABZR87_RS02505: ABZR87_RS02505 - ATP phosphoribosyltransferase, at 531,216 to 531,905 _RS02505 ABZR87_RS02510: ABZR87_RS02510 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 531,925 to 533,190 _RS02510
Group Condition ABZR87_RS02490 ABZR87_RS02495 ABZR87_RS02500 ABZR87_RS02505 ABZR87_RS02510
carbon source Octanoic (C) N.D. -1.1 N.D. N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 N.D. N.D. N.D.
carbon source Dodecandioic (C) N.D. -0.6 N.D. N.D. N.D.
carbon source butyrate (C) N.D. -0.6 N.D. N.D. N.D.
carbon source Sebacic (C) N.D. -0.5 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.5 N.D. N.D. N.D.
carbon source succinate (C) N.D. -0.5 N.D. N.D. N.D.
carbon source acetate (C) N.D. -0.5 N.D. N.D. N.D.
carbon source Lauric (C) N.D. -0.5 N.D. N.D. N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. -0.4 N.D. N.D. N.D.
carbon source succinate (C) N.D. -0.4 N.D. N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -0.4 N.D. N.D. N.D.
carbon source 3-Hydroxypropionate (C) N.D. -0.4 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.4 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.4 N.D. N.D. N.D.
soil soil sample 1; outgrowth in LB N.D. -0.4 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM N.D. -0.4 N.D. N.D. N.D.
carbon source Sebacic (C) N.D. -0.4 N.D. N.D. N.D.
nitrogen source nitrogen source nitrate 5mM N.D. -0.4 N.D. N.D. N.D.
soil soil sample 4; outgrowth in LB N.D. -0.3 N.D. N.D. N.D.
carbon source Heptanoic (C) N.D. -0.3 N.D. N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -0.3 N.D. N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB N.D. -0.3 N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) N.D. -0.3 N.D. N.D. N.D.
carbon source 1,2-Propanediol (C) N.D. -0.3 N.D. N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. -0.3 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.3 N.D. N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.3 N.D. N.D. N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. +0.3 N.D. N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. +0.3 N.D. N.D. N.D.
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