Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS02360 and ABZR87_RS02365 are separated by 29 nucleotidesABZR87_RS02365 and ABZR87_RS02370 are separated by 72 nucleotidesABZR87_RS02370 and ABZR87_RS02375 are separated by 150 nucleotidesABZR87_RS02375 and ABZR87_RS02380 are separated by 37 nucleotides ABZR87_RS02360: ABZR87_RS02360 - tRNA-Thr, at 505,754 to 505,829 _RS02360 ABZR87_RS02365: ABZR87_RS02365 - ClpXP protease specificity-enhancing factor, at 505,859 to 506,356 _RS02365 ABZR87_RS02370: ABZR87_RS02370 - glutathione S-transferase N-terminal domain-containing protein, at 506,429 to 507,040 _RS02370 ABZR87_RS02375: ABZR87_RS02375 - cytochrome c1, at 507,191 to 507,934 _RS02375 ABZR87_RS02380: ABZR87_RS02380 - cytochrome bc complex cytochrome b subunit, at 507,972 to 509,375 _RS02380
Group Condition ABZR87_RS02360 ABZR87_RS02365 ABZR87_RS02370 ABZR87_RS02375 ABZR87_RS02380
carbon source Octanoic (C) N.D. -3.6 N.D. -4.4 -4.6
carbon source Octanoic (C) N.D. -2.7 N.D. -4.5 -4.5
carbon source Heptanoic (C) N.D. -1.1 N.D. -4.3 -4.0
carbon source Heptanoic (C) N.D. -1.1 N.D. -4.0 -4.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB N.D. +0.3 N.D. -4.4 -4.9
no_plant_soil no_plant_soil sample 1; outgrowth in LB N.D. +0.6 N.D. -4.5 -5.1
carbon source Sebacic (C) N.D. -0.9 N.D. -3.7 -4.4
no_plant_soil no_plant_soil sample 2; outgrowth in LB N.D. +0.5 N.D. -4.0 -4.1
carbon source Dodecandioic (C) N.D. -0.6 N.D. -2.9 -3.5
carbon source Sebacic (C) N.D. -0.5 N.D. -3.0 -3.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. +1.2 N.D. -3.5 -4.1
carbon source Azelaic (C) N.D. -0.3 N.D. -2.1 -3.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.3 N.D. -3.2 -2.7
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.8 N.D. -2.6 -2.8
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. +0.2 N.D. -3.8 -2.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.7 N.D. -2.2 -2.9
carbon source Dodecandioic (C) N.D. -0.4 N.D. -2.8 -2.6
soil soil EcoFAB sample 2; outgrowth in LB N.D. +0.0 N.D. -2.8 -2.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.6 N.D. -2.2 -2.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.0 N.D. -2.4 -2.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.4 N.D. -1.9 -2.2
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB N.D. +1.0 N.D. -2.3 -3.0
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. +0.9 N.D. -2.8 -2.4
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. +0.3 N.D. -2.4 -2.1
soil soil sample 3; outgrowth in LB N.D. +0.4 N.D. -2.8 -1.8
root root EcoFAB sample 1; outgrowth in LB N.D. +0.4 N.D. -2.2 -2.2
soil soil EcoFAB sample 1; outgrowth in LB N.D. +0.9 N.D. -2.7 -2.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. +1.2 N.D. -2.2 -2.6
root root EcoFAB sample 2; outgrowth in LB N.D. +1.0 N.D. -2.6 -1.7
rhizosphere rhizosphere sample 2; outgrowth in LB N.D. +0.8 N.D. -2.4 -1.5
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