Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS02155 and ABZR87_RS02160 are separated by 1 nucleotidesABZR87_RS02160 and ABZR87_RS02165 are separated by 10 nucleotidesABZR87_RS02165 and ABZR87_RS02170 overlap by 4 nucleotidesABZR87_RS02170 and ABZR87_RS02175 are separated by 414 nucleotides ABZR87_RS02155: ABZR87_RS02155 - anthranilate phosphoribosyltransferase, at 461,693 to 462,730 _RS02155 ABZR87_RS02160: ABZR87_RS02160 - indole-3-glycerol phosphate synthase TrpC, at 462,732 to 463,535 _RS02160 ABZR87_RS02165: ABZR87_RS02165 - CYTH domain-containing protein, at 463,546 to 464,205 _RS02165 ABZR87_RS02170: ABZR87_RS02170 - uracil-DNA glycosylase, at 464,202 to 464,993 _RS02170 ABZR87_RS02175: ABZR87_RS02175 - FUSC family protein, at 465,408 to 467,624 _RS02175
Group Condition ABZR87_RS02155 ABZR87_RS02160 ABZR87_RS02165 ABZR87_RS02170 ABZR87_RS02175
carbon source Trans-2-methyl-2-butenoic (C) -6.7 -7.6 -0.2 N.D. -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -6.4 -7.8 -0.1 N.D. -0.0
carbon source Lauric (C) -5.9 -6.3 -2.0 N.D. -0.1
carbon source Octanoic (C) -5.4 -5.4 -3.0 N.D. -0.2
no_plant_soil no_plant_soil sample 1; outgrowth in LB -6.6 -6.1 -0.7 N.D. -0.2
carbon source D-Galactose (C) -7.1 -6.2 -0.2 N.D. -0.1
carbon source Trans-2-methyl-2-butenoic (C) -7.2 -6.4 +0.1 N.D. +0.0
carbon source D-Galactose (C) -5.9 -7.5 +0.0 N.D. -0.0
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -5.1 -6.7 -1.0 N.D. +0.0
soil soil EcoFAB sample 1; outgrowth in LB -5.5 -6.5 -0.9 N.D. +0.1
nitrogen source nitrogen source nitrate 5mM -5.2 -7.8 +0.1 N.D. +0.1
carbon source Protocatechuic Acid (C) -6.5 -6.0 -0.0 N.D. -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -6.0 -6.3 -0.2 N.D. +0.0
carbon source Azelaic (C) -6.4 -6.1 +0.3 N.D. -0.3
carbon source Pimelic (C) -6.4 -5.9 -0.1 N.D. -0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -6.8 -5.5 -0.2 N.D. +0.0
nitrogen source nitrogen source nitrate 5mM -7.3 -5.0 -0.0 N.D. -0.0
carbon source Heptanoic (C) -5.4 -5.9 -0.6 N.D. -0.5
carbon source Beta-alanine (C) -6.0 -6.4 +0.0 N.D. +0.0
nitrogen source nitrogen source Ammonium chloride 20mM -6.2 -6.1 -0.1 N.D. +0.1
carbon source Dodecandioic (C) -5.9 -5.8 -0.4 N.D. -0.2
carbon source Protocatechuic Acid (C) -5.7 -6.3 -0.2 N.D. +0.0
carbon source propionate (C) -5.7 -6.3 +0.0 N.D. -0.1
carbon source Protocatechuic Acid (C) -5.8 -6.0 -0.2 N.D. -0.0
carbon source Beta-alanine (C) -5.1 -6.9 +0.1 N.D. -0.0
carbon source 4-Hydroxybenzoic Acid (C) -6.5 -5.9 +0.6 N.D. -0.2
carbon source Glycerol (C) -5.9 -5.7 -0.1 N.D. -0.1
soil soil EcoFAB sample 2; outgrowth in LB -5.2 -5.5 -0.9 N.D. -0.1
carbon source Pimelic (C) -5.8 -5.9 +0.2 N.D. +0.0
carbon source Heptanoic (C) -5.8 -5.0 -0.2 N.D. -0.5
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