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Protein
Homologs
Fitness for 5 genes in
Ralstonia sp. UNC404CL21Col
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR87_RS02135 and ABZR87_RS02140 are separated by 401 nucleotides
ABZR87_RS02140 and ABZR87_RS02145 are separated by 16 nucleotides
ABZR87_RS02145 and ABZR87_RS02150 overlap by 1 nucleotides
ABZR87_RS02150 and ABZR87_RS02155 are separated by 13 nucleotides
ABZR87_RS02135: ABZR87_RS02135 - phosphoglycolate phosphatase, at 457,997 to 458,725
_RS02135
ABZR87_RS02140: ABZR87_RS02140 - anthranilate synthase component I, at 459,127 to 460,656
_RS02140
ABZR87_RS02145: ABZR87_RS02145 - aminodeoxychorismate/anthranilate synthase component II, at 460,673 to 461,242
_RS02145
ABZR87_RS02150: ABZR87_RS02150 - lysozyme inhibitor LprI family protein, at 461,242 to 461,679
_RS02150
ABZR87_RS02155: ABZR87_RS02155 - anthranilate phosphoribosyltransferase, at 461,693 to 462,730
_RS02155
Group
Condition
ABZR87
_RS02135
ABZR87
_RS02140
ABZR87
_RS02145
ABZR87
_RS02150
ABZR87
_RS02155
nitrogen source
nitrogen source nitrate 5mM
+0.1
-5.5
-5.6
-1.9
-7.3
nitrogen source
nitrogen source Ammonium chloride 20mM
+0.0
-6.0
-5.8
-1.2
-6.4
carbon source
Dodecandioic (C)
-0.0
-4.8
-4.5
-4.2
-5.9
no_plant_soil
no_plant_soil sample 1; outgrowth in LB
-0.3
-5.7
-5.9
-0.7
-6.6
carbon source
4-Hydroxybenzoic Acid (C)
-0.3
-5.9
-5.0
-1.2
-6.5
carbon source
Lauric (C)
-0.1
-5.3
-5.1
-2.2
-5.9
carbon source
Heptanoic (C)
-0.2
-4.9
-4.7
-2.6
-5.8
carbon source
Protocatechuic Acid (C)
-0.1
-4.8
-5.6
-1.1
-6.5
carbon source
D-Galactose (C)
-0.1
-4.4
-5.7
-0.6
-7.1
carbon source
Protocatechuic Acid (C)
-0.1
-5.1
-5.6
-1.3
-5.8
nitrogen source
nitrogen source nitrate 20mM
-0.0
-5.3
-5.8
-0.7
-6.1
carbon source
Trans-2-methyl-2-butenoic (C)
-0.0
-4.5
-5.3
-0.8
-7.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.1
-5.2
-5.0
-0.8
-6.8
carbon source
Protocatechuic Acid (C)
-0.0
-5.1
-5.6
-1.1
-5.7
carbon source
Azelaic (C)
+0.1
-5.8
-4.8
-0.4
-6.4
carbon source
D-Galactose (C)
+0.0
-4.9
-5.6
-0.9
-5.9
carbon source
Heptanoic (C)
-0.2
-5.1
-5.0
-1.4
-5.4
carbon source
Sebacic (C)
+0.2
-4.9
-3.0
-4.5
-4.8
carbon source
Beta-alanine (C)
-0.2
-4.7
-5.7
-0.4
-6.0
carbon source
Octanoic (C)
-0.2
-4.2
-4.1
-2.9
-5.4
carbon source
Hexanoic (C)
+0.0
-5.2
-5.0
-0.9
-5.7
no_plant_soil
no_plant_soil sample 3; outgrowth in LB
+0.1
-5.8
-5.9
+1.2
-6.0
carbon source
Pimelic (C)
-0.2
-4.4
-5.2
-0.3
-6.4
carbon source
Pimelic (C)
-0.0
-5.5
-4.1
-0.3
-5.8
carbon source
Glycerol (C)
-0.1
-5.1
-4.5
-0.1
-5.9
carbon source
D-Glucose (C)
+0.1
-4.2
-5.1
-1.5
-5.0
carbon source
Pimelic (C)
-0.0
-4.8
-5.5
-0.4
-5.0
carbon source
Pimelic (C)
-0.1
-4.6
-5.1
+0.0
-5.9
carbon source
Carbon source D-Glucose 10 mM
+0.1
-4.8
-4.4
+0.0
-6.5
carbon source
Glycerol (C)
-0.0
-4.5
-5.7
+0.1
-5.4
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