Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS02110 and ABZR87_RS02115 are separated by 16 nucleotidesABZR87_RS02115 and ABZR87_RS02120 are separated by 74 nucleotidesABZR87_RS02120 and ABZR87_RS02125 are separated by 6 nucleotidesABZR87_RS02125 and ABZR87_RS02130 are separated by 130 nucleotides ABZR87_RS02110: ABZR87_RS02110 - phenylacetate--CoA ligase PaaK, at 453,977 to 455,281 _RS02110 ABZR87_RS02115: ABZR87_RS02115 - murein transglycosylase A, at 455,298 to 456,452 _RS02115 ABZR87_RS02120: ABZR87_RS02120 - hypothetical protein, at 456,527 to 456,760 _RS02120 ABZR87_RS02125: ABZR87_RS02125 - Co2+/Mg2+ efflux protein ApaG, at 456,767 to 457,141 _RS02125 ABZR87_RS02130: ABZR87_RS02130 - ribulose-phosphate 3-epimerase, at 457,272 to 458,000 _RS02130
Group Condition ABZR87_RS02110 ABZR87_RS02115 ABZR87_RS02120 ABZR87_RS02125 ABZR87_RS02130
carbon source Lauric (C) +0.0 -5.7 N.D. +0.2 N.D.
carbon source Octanoic (C) +0.1 -0.8 N.D. -0.9 N.D.
carbon source Sebacic (C) -0.1 -0.6 N.D. -0.5 N.D.
carbon source Octanoic (C) -0.0 -0.5 N.D. -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.5 N.D. -0.2 N.D.
carbon source Heptanoic (C) +0.2 -0.3 N.D. -0.6 N.D.
carbon source Heptanoic (C) +0.2 -0.5 N.D. -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.6 N.D. +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.5 N.D. +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.5 N.D. +0.0 N.D.
carbon source Dodecandioic (C) +0.2 -0.1 N.D. -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.4 N.D. +0.2 N.D.
carbon source Protocatechuic Acid (C) +0.1 +0.4 N.D. -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.3 N.D. +0.2 N.D.
carbon source Hexanoic (C) +0.2 +0.2 N.D. -0.2 N.D.
carbon source butyrate (C) -0.1 +0.5 N.D. -0.1 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 +0.5 N.D. -0.2 N.D.
micoeukaryotes C.elegans, mixed culture-2 -0.1 +0.5 N.D. -0.0 N.D.
nitrogen source nitrogen source nitrate 5mM -0.1 +0.5 N.D. +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.8 N.D. -0.3 N.D.
nitrogen source nitrogen source nitrite 5mM +0.1 +0.4 N.D. +0.2 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.0 +0.6 N.D. +0.1 N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 +0.7 N.D. -0.0 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 +0.6 N.D. +0.0 N.D.
root root sample 4; outgrowth in LB +0.1 +0.6 N.D. +0.1 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.2 +0.7 N.D. +0.0 N.D.
nitrogen source nitrogen source nitrate 5mM +0.3 +0.6 N.D. +0.1 N.D.
nitrogen source nitrogen source nitrate 20mM +0.0 +0.8 N.D. +0.1 N.D.
root root sample 6; outgrowth in LB +0.3 +0.4 N.D. +0.2 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.0 +0.9 N.D. +0.3 N.D.
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