Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS02065 and ABZR87_RS02070 are separated by 178 nucleotidesABZR87_RS02070 and ABZR87_RS02075 are separated by 114 nucleotidesABZR87_RS02075 and ABZR87_RS02080 are separated by 265 nucleotidesABZR87_RS02080 and ABZR87_RS02085 are separated by 36 nucleotides ABZR87_RS02065: ABZR87_RS02065 - M20 aminoacylase family protein, at 444,513 to 445,700 _RS02065 ABZR87_RS02070: ABZR87_RS02070 - 5S ribosomal RNA, at 445,879 to 445,991 _RS02070 ABZR87_RS02075: ABZR87_RS02075 - 23S ribosomal RNA, at 446,106 to 448,984 _RS02075 ABZR87_RS02080: ABZR87_RS02080 - tRNA-Ala, at 449,250 to 449,325 _RS02080 ABZR87_RS02085: ABZR87_RS02085 - tRNA-Ile, at 449,362 to 449,438 _RS02085
Group Condition ABZR87_RS02065 ABZR87_RS02070 ABZR87_RS02075 ABZR87_RS02080 ABZR87_RS02085
soil soil EcoFAB sample 1; outgrowth in LB -0.1 N.D. -4.7 N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.2 N.D. -4.1 N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB +0.0 N.D. -3.8 N.D. N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.0 N.D. -3.4 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 N.D. -3.4 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.3 N.D. -2.6 N.D. N.D.
root root EcoFAB sample 2; outgrowth in LB -0.1 N.D. -2.9 N.D. N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -0.0 N.D. -2.9 N.D. N.D.
soil soil sample 8; outgrowth in LB -0.1 N.D. -2.8 N.D. N.D.
soil soil sample 1; outgrowth in LB -0.0 N.D. -2.8 N.D. N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 N.D. -3.0 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.0 N.D. -2.7 N.D. N.D.
carbon source Pimelic (C) -0.1 N.D. -2.3 N.D. N.D.
soil soil sample 7; outgrowth in LB -0.0 N.D. -2.3 N.D. N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.1 N.D. -2.4 N.D. N.D.
root root EcoFAB sample 1; outgrowth in LB +0.0 N.D. -2.1 N.D. N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.0 N.D. -2.1 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 N.D. -2.3 N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.1 N.D. -1.9 N.D. N.D.
carbon source L-Glutamic (C) +0.1 N.D. -2.1 N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.1 N.D. -1.8 N.D. N.D.
carbon source Protocatechuic Acid (C) +0.2 N.D. -2.0 N.D. N.D.
micoeukaryotes C.elegans, mixed culture-2 -0.2 N.D. -1.5 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.3 N.D. -1.3 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 N.D. -1.6 N.D. N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB +0.1 N.D. -1.6 N.D. N.D.
carbon source Sebacic (C) +0.4 N.D. -1.7 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 N.D. -1.6 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 N.D. +1.2 N.D. N.D.
carbon source Heptanoic (C) +0.4 N.D. +1.6 N.D. N.D.
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