Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS01745	ABZR87_RS01750	ABZR87_RS01755	ABZR87_RS01760	ABZR87_RS01765
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-4.6	+0.3	+0.4	-4.9	-1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.3	-0.8	-0.7	-2.7	-1.7
root	root EcoFAB sample 2; outgrowth in LB	-4.1	+0.1	+0.2	-2.3	-2.4
carbon source	Octanoic (C)	-3.9	-0.5	-0.3	+0.7	-2.7
root	root EcoFAB sample 1; outgrowth in LB	-4.6	-0.2	-0.1	+0.6	-1.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.6	-0.4	-0.4	+0.3	-0.9
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.5	-0.8	-0.5	-0.9	-0.2
carbon source	Heptanoic (C)	-3.3	-0.3	+0.0	-1.0	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	+0.4	-0.2	+0.1	-5.0	+0.0
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-3.5	+0.7	+0.5	-0.9	-1.1
root	root sample 6; outgrowth in LB	-1.1	+1.1	+0.0	-3.1	-1.0
carbon source	Azelaic (C)	+0.3	+0.1	+0.2	-4.4	-0.1
carbon source	Disodium Glutarate (C)	-2.4	-0.3	-0.1	-1.2	+0.2
carbon source	Octanoic (C)	-2.7	+0.6	-0.6	-0.9	+0.1
soil	soil EcoFAB sample 1; outgrowth in LB	-5.8	+1.5	+1.4	-0.0	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.5	-0.4	-0.1	-1.6	+0.4
soil	soil EcoFAB sample 2; outgrowth in LB	-5.0	+1.4	+1.4	+0.7	-1.3
carbon source	Heptanoic (C)	-3.1	-0.5	+0.1	+0.8	+0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.7	+1.1	+0.4	-0.5	-1.1
micoeukaryotes	Dictyostellum sp.mixed culture-2	-3.6	+1.0	+1.0	-0.1	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.0	-0.8	-0.6	+1.7	+0.0
micoeukaryotes	C.elegans, mixed culture-1	-1.6	+0.9	+0.8	+1.0	-0.6
micoeukaryotes	C.elegans, mixed culture-2	-1.8	+0.8	+0.9	+1.2	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-1.7	+2.8	+1.8	+0.3	-0.3
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-0.9	+3.7	+2.7	-0.1	-0.5
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-1.1	+4.2	+2.6	+0.1	-0.6
phage	Ra1_0.01	+0.9	+2.2	+2.1	-0.5	+1.3
phage	Ra3_0.1	+0.7	+2.4	+2.4	-0.2	+1.8
phage	Ra3_1	+0.5	+6.0	+6.0	-0.7	+4.3
phage	Ra1_0.1	+0.8	+6.2	+6.1	-0.7	+4.7