Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01580 and ABZR87_RS01585 are separated by 1 nucleotidesABZR87_RS01585 and ABZR87_RS01590 are separated by 39 nucleotidesABZR87_RS01590 and ABZR87_RS01595 are separated by 209 nucleotidesABZR87_RS01595 and ABZR87_RS01600 are separated by 12 nucleotides ABZR87_RS01580: ABZR87_RS01580 - CinA family protein, at 333,486 to 333,986 _RS01580 ABZR87_RS01585: ABZR87_RS01585 - hypothetical protein, at 333,988 to 334,206 _RS01585 ABZR87_RS01590: ABZR87_RS01590 - orotidine-5'-phosphate decarboxylase, at 334,246 to 335,061 _RS01590 ABZR87_RS01595: ABZR87_RS01595 - magnesium/cobalt transporter CorA, at 335,271 to 336,233 _RS01595 ABZR87_RS01600: ABZR87_RS01600 - monofunctional biosynthetic peptidoglycan transglycosylase, at 336,246 to 336,950 _RS01600
Group Condition ABZR87_RS01580 ABZR87_RS01585 ABZR87_RS01590 ABZR87_RS01595 ABZR87_RS01600
phage Ra1_0.1 -1.7 N.D. N.D. -0.5 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -2.0 N.D. N.D. +0.4 -0.1
soil soil EcoFAB sample 1; outgrowth in LB -1.8 N.D. N.D. +0.3 +0.1
root root sample 5; outgrowth in LB -1.0 N.D. N.D. -0.3 -0.0
carbon source Octanoic (C) -1.4 N.D. N.D. -0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. N.D. -0.6 -0.3
carbon source Sebacic (C) -1.3 N.D. N.D. +0.0 +0.2
root root EcoFAB sample 1; outgrowth in LB -0.5 N.D. N.D. -0.2 -0.2
carbon source Octanoic (C) -0.6 N.D. N.D. -0.4 +0.1
rhizosphere rhizosphere sample 8; outgrowth in LB -0.7 N.D. N.D. +0.0 -0.2
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.7 N.D. N.D. -0.3 +0.1
nitrogen source nitrogen source nitrate 5mM -0.7 N.D. N.D. -0.2 +0.1
carbon source succinate (C) -0.7 N.D. N.D. -0.1 +0.1
carbon source Heptanoic (C) -0.6 N.D. N.D. -0.2 +0.3
carbon source Hexanoic (C) -0.7 N.D. N.D. +0.2 -0.0
rhizosphere rhizosphere sample 3; outgrowth in LB -0.8 N.D. N.D. +0.5 -0.1
carbon source Sebacic (C) -0.9 N.D. N.D. +0.3 +0.3
nitrogen source nitrogen source nitrite 5mM -0.6 N.D. N.D. +0.1 +0.2
carbon source Pimelic (C) -0.5 N.D. N.D. +0.3 +0.1
nitrogen source nitrogen source nitrate 20mM -0.5 N.D. N.D. +0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. N.D. +0.3 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.6 N.D. N.D. -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 N.D. N.D. -0.2 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 N.D. N.D. +0.6 +0.2
carbon source Azelaic (C) +0.5 N.D. N.D. +0.1 +0.3
rhizosphere rhizosphere sample 9; outgrowth in LB +0.3 N.D. N.D. +0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 N.D. N.D. +0.5 +0.1
soil soil EcoFAB sample 2; outgrowth in LB +0.9 N.D. N.D. +0.1 +0.0
root root sample 6; outgrowth in LB +0.3 N.D. N.D. +0.5 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +5.2 N.D. N.D. +0.2 +0.5
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