Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01550 and ABZR87_RS01555 are separated by 101 nucleotidesABZR87_RS01555 and ABZR87_RS01560 overlap by 4 nucleotidesABZR87_RS01560 and ABZR87_RS01565 are separated by 473 nucleotidesABZR87_RS01565 and ABZR87_RS01570 are separated by 161 nucleotides ABZR87_RS01550: ABZR87_RS01550 - L-arabinose ABC transporter permease AraH, at 326,649 to 327,659 _RS01550 ABZR87_RS01555: ABZR87_RS01555 - barstar family protein, at 327,761 to 328,384 _RS01555 ABZR87_RS01560: ABZR87_RS01560 - ribonuclease domain-containing protein, at 328,381 to 328,812 _RS01560 ABZR87_RS01565: ABZR87_RS01565 - NADP-dependent malic enzyme, at 329,286 to 331,631 _RS01565 ABZR87_RS01570: ABZR87_RS01570 - thiamine-phosphate kinase, at 331,793 to 332,878 _RS01570
Group Condition ABZR87_RS01550 ABZR87_RS01555 ABZR87_RS01560 ABZR87_RS01565 ABZR87_RS01570
rhizosphere rhizosphere sample 2; outgrowth in LB -0.3 -2.0 -0.0 -1.0 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.3 -1.8 -0.5 -1.0 N.D.
carbon source succinate (C) +0.3 +0.0 +0.0 -3.3 N.D.
carbon source Protocatechuic Acid (C) -0.4 -0.7 +0.3 -2.0 N.D.
nitrogen source nitrogen source nitrate 5mM -0.6 -3.2 +0.7 +0.4 N.D.
soil soil sample 9; outgrowth in LB -0.7 -1.1 -0.1 -0.7 N.D.
soil soil sample 3; outgrowth in LB +0.3 -2.0 -0.2 -0.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -2.3 +0.5 -0.4 N.D.
soil soil sample 1; outgrowth in LB +0.3 -1.2 -0.2 -1.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -2.2 +0.4 -0.4 N.D.
root root sample 5; outgrowth in LB +0.0 -0.9 +1.0 -1.2 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.7 +0.4 +0.5 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.5 -1.2 +0.6 -0.5 N.D.
carbon source Protocatechuic Acid (C) +0.2 +0.9 +0.3 -1.9 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -1.6 +1.1 +0.2 N.D.
carbon source Heptanoic (C) +0.1 -1.5 -0.5 +1.8 N.D.
carbon source Heptanoic (C) -0.1 -1.1 -0.1 +1.7 N.D.
phage Ra3_1 -0.1 -1.6 +0.8 +1.6 N.D.
carbon source Protocatechuic Acid (C) +0.0 +1.6 +0.1 -1.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -1.1 +2.4 -0.4 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB +0.7 +1.3 -0.1 -0.9 N.D.
phage Ra1_0.1 -0.3 -0.5 +0.8 +1.5 N.D.
micoeukaryotes C.elegans, mixed culture-2 +0.5 +1.8 +0.3 -0.1 N.D.
carbon source Octanoic (C) -0.5 +1.1 -2.2 +3.9 N.D.
carbon source Dodecandioic (C) -0.3 +1.5 -0.5 +2.3 N.D.
carbon source Sebacic (C) +0.6 -0.2 +0.0 +2.8 N.D.
carbon source Lauric (C) +0.2 +2.3 -0.2 +1.1 N.D.
carbon source Azelaic (C) +0.3 +1.2 -0.2 +2.3 N.D.
carbon source Dodecandioic (C) +0.4 +1.8 -0.2 +2.2 N.D.
carbon source Octanoic (C) +0.2 +2.3 -0.6 +3.9 N.D.
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