Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS01420 and ABZR87_RS01425 are separated by 152 nucleotidesABZR87_RS01425 and ABZR87_RS01430 are separated by 72 nucleotidesABZR87_RS01430 and ABZR87_RS01435 are separated by 314 nucleotidesABZR87_RS01435 and ABZR87_RS01440 are separated by 86 nucleotides ABZR87_RS01420: ABZR87_RS01420 - outer membrane protein assembly factor BamE, at 298,519 to 299,175 _RS01420 ABZR87_RS01425: ABZR87_RS01425 - ferric iron uptake transcriptional regulator, at 299,328 to 299,759 _RS01425 ABZR87_RS01430: ABZR87_RS01430 - LysR family transcriptional regulator, at 299,832 to 300,875 _RS01430 ABZR87_RS01435: ABZR87_RS01435 - type I glyceraldehyde-3-phosphate dehydrogenase, at 301,190 to 302,188 _RS01435 ABZR87_RS01440: ABZR87_RS01440 - transketolase, at 302,275 to 304,290 _RS01440
Group Condition ABZR87_RS01420 ABZR87_RS01425 ABZR87_RS01430 ABZR87_RS01435 ABZR87_RS01440
carbon source Octanoic (C) -1.8 -3.7 +1.5 N.D. N.D.
soil soil EcoFAB sample 1; outgrowth in LB -1.9 -1.2 +3.1 N.D. N.D.
root root EcoFAB sample 1; outgrowth in LB -2.1 -1.8 +4.3 N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB -1.5 -1.5 +3.8 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.2 -2.2 +3.9 N.D. N.D.
carbon source Octanoic (C) +2.5 -2.4 +2.5 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.7 -1.0 +4.7 N.D. N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.8 -1.9 +6.1 N.D. N.D.
soil soil sample 5; outgrowth in LB -0.7 -0.5 +5.1 N.D. N.D.
root root EcoFAB sample 2; outgrowth in LB -0.8 -0.9 +5.9 N.D. N.D.
soil soil sample 1; outgrowth in LB -0.7 -0.7 +5.9 N.D. N.D.
soil soil sample 7; outgrowth in LB -0.8 -0.2 +5.8 N.D. N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.5 -1.2 +6.6 N.D. N.D.
soil soil sample 2; outgrowth in LB -0.5 -0.3 +6.0 N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.7 -1.0 +7.4 N.D. N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB -1.4 -0.0 +8.1 N.D. N.D.
soil soil sample 4; outgrowth in LB -0.9 -0.3 +8.0 N.D. N.D.
soil soil sample 9; outgrowth in LB -0.3 -0.5 +8.1 N.D. N.D.
soil soil sample 3; outgrowth in LB -0.2 +0.3 +7.3 N.D. N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -0.3 +0.1 +7.8 N.D. N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 -0.0 +8.2 N.D. N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB -0.1 +0.2 +8.7 N.D. N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB +0.0 +0.0 +8.8 N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +0.3 +8.6 N.D. N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.4 +0.0 +9.1 N.D. N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 +0.4 +9.6 N.D. N.D.
root root sample 5; outgrowth in LB -0.1 +0.7 +9.4 N.D. N.D.
root root sample 4; outgrowth in LB -0.1 +0.2 +10.4 N.D. N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +0.5 +0.1 +10.7 N.D. N.D.
root root sample 6; outgrowth in LB +0.5 +1.4 +10.0 N.D. N.D.
remove
ABZR87_RS01420
plot		 remove
ABZR87_RS01425
plot		 remove
ABZR87_RS01430		 remove
ABZR87_RS01435
plot		 remove
ABZR87_RS01440
plot