Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01375 and ABZR87_RS01380 are separated by 82 nucleotidesABZR87_RS01380 and ABZR87_RS01385 are separated by 33 nucleotidesABZR87_RS01385 and ABZR87_RS01390 are separated by 17 nucleotidesABZR87_RS01390 and ABZR87_RS01395 are separated by 85 nucleotides ABZR87_RS01375: ABZR87_RS01375 - two-component system hybrid sensor histidine kinase/response regulator PhcR, at 287,619 to 288,725 _RS01375 ABZR87_RS01380: ABZR87_RS01380 - response regulator, at 288,808 to 289,815 _RS01380 ABZR87_RS01385: ABZR87_RS01385 - class I SAM-dependent RNA methyltransferase, at 289,849 to 291,258 _RS01385 ABZR87_RS01390: ABZR87_RS01390 - CopD family protein, at 291,276 to 291,698 _RS01390 ABZR87_RS01395: ABZR87_RS01395 - glutamate-5-semialdehyde dehydrogenase, at 291,784 to 293,064 _RS01395
Group Condition ABZR87_RS01375 ABZR87_RS01380 ABZR87_RS01385 ABZR87_RS01390 ABZR87_RS01395
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +3.6 +0.9 +0.0 N.D. +0.3
no_plant_soil no_plant_soil sample 1; outgrowth in LB +4.4 +0.4 +0.0 N.D. -0.0
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +4.5 +0.8 +0.1 N.D. +0.4
soil soil sample 6; outgrowth in LB +8.1 +0.0 +0.2 N.D. -0.2
soil soil sample 5; outgrowth in LB +8.2 +0.0 +0.0 N.D. +0.1
soil soil sample 3; outgrowth in LB +8.1 +0.2 -0.0 N.D. +0.2
soil soil sample 4; outgrowth in LB +8.0 +0.2 +0.3 N.D. +0.3
soil soil sample 8; outgrowth in LB +9.1 +0.1 +0.1 N.D. -0.3
soil soil sample 9; outgrowth in LB +8.7 +0.4 +0.2 N.D. -0.1
soil soil sample 2; outgrowth in LB +9.0 +0.1 +0.1 N.D. -0.0
soil soil sample 7; outgrowth in LB +8.9 +0.2 -0.0 N.D. +0.1
soil soil sample 1; outgrowth in LB +9.3 +0.0 +0.0 N.D. -0.1
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +9.5 +0.4 -0.1 N.D. -0.5
soil soil EcoFAB sample 2; outgrowth in LB +8.7 +0.5 -0.0 N.D. +0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +9.4 +0.6 -0.1 N.D. +0.1
soil soil EcoFAB sample 1; outgrowth in LB +9.0 +1.4 +0.3 N.D. -0.7
root root EcoFAB sample 2; outgrowth in LB +9.8 +0.5 -0.1 N.D. +0.0
root root EcoFAB sample 1; outgrowth in LB +10.0 +0.7 -0.1 N.D. -0.1
rhizosphere rhizosphere sample 1; outgrowth in LB +11.5 +0.5 +0.1 N.D. -0.6
rhizosphere rhizosphere sample 5; outgrowth in LB +10.5 +0.5 +0.2 N.D. +0.4
rhizosphere rhizosphere sample 4; outgrowth in LB +10.5 +0.7 +0.2 N.D. +0.3
root root sample 4; outgrowth in LB +11.0 +0.7 -0.0 N.D. +0.0
rhizosphere rhizosphere sample 3; outgrowth in LB +11.7 +0.5 +0.2 N.D. -0.2
rhizosphere rhizosphere sample 6; outgrowth in LB +11.3 +0.6 +0.2 N.D. -0.0
root root sample 5; outgrowth in LB +10.9 +0.9 +0.0 N.D. +0.3
rhizosphere rhizosphere sample 8; outgrowth in LB +11.2 +0.7 +0.0 N.D. +0.5
rhizosphere rhizosphere sample 2; outgrowth in LB +11.9 +0.6 +0.1 N.D. -0.2
rhizosphere rhizosphere sample 7; outgrowth in LB +11.2 +0.8 -0.0 N.D. +0.5
rhizosphere rhizosphere sample 9; outgrowth in LB +11.1 +0.9 +0.0 N.D. +0.7
root root sample 6; outgrowth in LB +12.0 +1.3 -0.1 N.D. +0.2
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