Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01300 and ABZR87_RS01305 are separated by 63 nucleotidesABZR87_RS01305 and ABZR87_RS01310 are separated by 99 nucleotidesABZR87_RS01310 and ABZR87_RS01315 are separated by 263 nucleotidesABZR87_RS01315 and ABZR87_RS01320 are separated by 239 nucleotides ABZR87_RS01300: ABZR87_RS01300 - YceI family protein, at 271,556 to 272,152 _RS01300 ABZR87_RS01305: ABZR87_RS01305 - YceI family protein, at 272,216 to 272,788 _RS01305 ABZR87_RS01310: ABZR87_RS01310 - cytochrome b, at 272,888 to 273,469 _RS01310 ABZR87_RS01315: ABZR87_RS01315 - adenylosuccinate lyase, at 273,733 to 275,106 _RS01315 ABZR87_RS01320: ABZR87_RS01320 - glutathione S-transferase, at 275,346 to 275,954 _RS01320
Group Condition ABZR87_RS01300 ABZR87_RS01305 ABZR87_RS01310 ABZR87_RS01315 ABZR87_RS01320
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.1 -0.2 N.D. -0.6
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +0.1 -0.4 N.D. -0.0
carbon source Sebacic (C) +0.3 -0.8 -0.2 N.D. -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.0 -0.1 N.D. -0.4
carbon source Heptanoic (C) -0.1 -0.3 +0.0 N.D. -0.3
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 +0.0 -0.3 N.D. +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.5 -0.4 N.D. +0.0
carbon source Octanoic (C) -0.2 -0.1 +0.2 N.D. -0.3
root root sample 5; outgrowth in LB -0.2 +0.3 -0.1 N.D. -0.4
carbon source Azelaic (C) -0.1 +0.2 +0.1 N.D. -0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.4 +0.1 N.D. -0.2
carbon source Disodium Glutarate (C) -0.1 +0.3 -0.0 N.D. -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.6 +0.3 +0.1 N.D. -0.2
nitrogen source nitrogen source nitrite 0.5mM +0.1 -0.1 +0.1 N.D. -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.2 -0.2 N.D. -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.3 -0.2 N.D. -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.1 +0.2 N.D. +0.1
rhizosphere rhizosphere sample 4; outgrowth in LB +0.4 +0.2 -0.3 N.D. -0.1
soil soil EcoFAB sample 1; outgrowth in LB -0.4 +0.6 -0.1 N.D. +0.2
carbon source Protocatechuic Acid (C) -0.1 +0.5 +0.2 N.D. -0.2
root root EcoFAB sample 1; outgrowth in LB +0.1 +0.3 +0.3 N.D. -0.1
root root sample 6; outgrowth in LB -0.5 +0.6 -0.1 N.D. +0.6
carbon source Protocatechuic Acid (C) +0.3 +0.0 +0.5 N.D. -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.7 +0.1 N.D. -0.0
rhizosphere rhizosphere sample 2; outgrowth in LB +0.1 +0.3 +0.1 N.D. +0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.5 -0.2 +0.1 N.D. +0.3
rhizosphere rhizosphere sample 8; outgrowth in LB +0.2 +0.5 +0.1 N.D. +0.1
nitrogen source nitrogen source nitrite 5mM +0.2 +0.3 +0.3 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.2 +0.2 N.D. +0.7
carbon source Octanoic (C) +0.6 +0.6 +0.2 N.D. +0.2
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