Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01210 and ABZR87_RS01215 are separated by 197 nucleotidesABZR87_RS01215 and ABZR87_RS01220 are separated by 66 nucleotidesABZR87_RS01220 and ABZR87_RS01225 are separated by 122 nucleotidesABZR87_RS01225 and ABZR87_RS01230 are separated by 30 nucleotides ABZR87_RS01210: ABZR87_RS01210 - type IV pilin protein, at 250,441 to 250,878 _RS01210 ABZR87_RS01215: ABZR87_RS01215 - PilT/PilU family type 4a pilus ATPase, at 251,076 to 252,215 _RS01215 ABZR87_RS01220: ABZR87_RS01220 - type IV pilus twitching motility protein PilT, at 252,282 to 253,325 _RS01220 ABZR87_RS01225: ABZR87_RS01225 - YggS family pyridoxal phosphate-dependent enzyme, at 253,448 to 254,164 _RS01225 ABZR87_RS01230: ABZR87_RS01230 - pyrroline-5-carboxylate reductase, at 254,195 to 255,019 _RS01230
Group Condition ABZR87_RS01210 ABZR87_RS01215 ABZR87_RS01220 ABZR87_RS01225 ABZR87_RS01230
soil soil sample 1; outgrowth in LB -0.2 +3.9 +2.5 -5.4 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.3 +3.1 +4.2 -5.5 N.D.
soil soil sample 6; outgrowth in LB +0.0 +4.0 +1.1 -2.6 N.D.
soil soil sample 2; outgrowth in LB -0.1 +3.4 +1.8 -1.9 N.D.
soil soil sample 3; outgrowth in LB -0.1 +4.7 +2.7 -3.9 N.D.
soil soil sample 7; outgrowth in LB -0.2 +4.3 +1.7 -2.3 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 +3.8 +5.3 -5.8 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.0 +3.5 +2.9 -2.8 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.1 +2.8 +4.7 -3.3 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.0 +3.1 +5.8 -4.6 N.D.
root root EcoFAB sample 1; outgrowth in LB +0.0 +3.6 +2.8 -2.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.0 +3.8 +4.0 -3.4 N.D.
soil soil sample 8; outgrowth in LB -0.2 +5.0 +2.4 -1.5 N.D.
soil soil sample 9; outgrowth in LB -0.1 +4.6 +2.9 -1.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.2 +3.3 +5.1 -2.4 N.D.
root root sample 5; outgrowth in LB -0.7 +6.2 +3.7 -2.6 N.D.
phage Ra1_0.1 +1.7 +0.1 +6.2 -0.4 N.D.
phage Ra3_1 +1.2 +0.4 +6.1 +0.0 N.D.
root root EcoFAB sample 2; outgrowth in LB +0.4 +4.2 +5.3 -1.9 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB -0.2 +6.7 +4.5 -2.5 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -0.1 +6.7 +4.6 -2.4 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB -0.2 +6.7 +3.7 -1.0 N.D.
root root sample 4; outgrowth in LB -0.1 +7.1 +3.8 -0.6 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB +0.2 +8.0 +4.7 -2.7 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.2 +7.6 +5.3 -2.2 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 +8.7 +4.9 -2.8 N.D.
root root sample 6; outgrowth in LB -0.3 +8.1 +4.9 -2.1 N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -0.0 +7.6 +4.8 -0.9 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.1 +7.5 +5.7 +0.3 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.2 +8.5 +6.3 -1.5 N.D.
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