Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS01200 and ABZR87_RS01205 overlap by 4 nucleotidesABZR87_RS01205 and ABZR87_RS01210 are separated by 8 nucleotidesABZR87_RS01210 and ABZR87_RS01215 are separated by 197 nucleotidesABZR87_RS01215 and ABZR87_RS01220 are separated by 66 nucleotides ABZR87_RS01200: ABZR87_RS01200 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 249,360 to 249,962 _RS01200 ABZR87_RS01205: ABZR87_RS01205 - GspH/FimT family pseudopilin, at 249,959 to 250,432 _RS01205 ABZR87_RS01210: ABZR87_RS01210 - type IV pilin protein, at 250,441 to 250,878 _RS01210 ABZR87_RS01215: ABZR87_RS01215 - PilT/PilU family type 4a pilus ATPase, at 251,076 to 252,215 _RS01215 ABZR87_RS01220: ABZR87_RS01220 - type IV pilus twitching motility protein PilT, at 252,282 to 253,325 _RS01220
Group Condition ABZR87_RS01200 ABZR87_RS01205 ABZR87_RS01210 ABZR87_RS01215 ABZR87_RS01220
soil soil sample 2; outgrowth in LB +0.0 N.D. -0.1 +3.4 +1.8
soil soil sample 7; outgrowth in LB +0.0 N.D. -0.2 +4.3 +1.7
soil soil sample 4; outgrowth in LB -0.1 N.D. +0.0 +3.9 +2.2
soil soil sample 1; outgrowth in LB -0.0 N.D. -0.2 +3.9 +2.5
root root EcoFAB sample 1; outgrowth in LB -0.1 N.D. +0.0 +3.6 +2.8
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.4 N.D. -0.0 +3.5 +2.9
soil soil sample 3; outgrowth in LB -0.2 N.D. -0.1 +4.7 +2.7
soil soil sample 8; outgrowth in LB -0.1 N.D. -0.2 +5.0 +2.4
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.1 N.D. -0.1 +2.8 +4.7
soil soil sample 9; outgrowth in LB +0.2 N.D. -0.1 +4.6 +2.9
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.1 N.D. +0.0 +3.8 +4.0
soil soil EcoFAB sample 1; outgrowth in LB +0.4 N.D. +0.3 +3.1 +4.2
phage Ra3_1 +0.3 N.D. +1.2 +0.4 +6.1
phage Ra1_0.1 +0.0 N.D. +1.7 +0.1 +6.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.4 N.D. +0.2 +3.3 +5.1
soil soil EcoFAB sample 2; outgrowth in LB -0.2 N.D. -0.0 +3.1 +5.8
root root sample 5; outgrowth in LB -0.2 N.D. -0.7 +6.2 +3.7
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.2 N.D. +0.2 +3.8 +5.3
root root EcoFAB sample 2; outgrowth in LB -0.2 N.D. +0.4 +4.2 +5.3
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 N.D. -0.2 +6.7 +3.7
root root sample 4; outgrowth in LB -0.4 N.D. -0.1 +7.1 +3.8
rhizosphere rhizosphere sample 4; outgrowth in LB -0.0 N.D. -0.2 +6.7 +4.5
rhizosphere rhizosphere sample 5; outgrowth in LB +0.1 N.D. -0.1 +6.7 +4.6
rhizosphere rhizosphere sample 8; outgrowth in LB +0.1 N.D. -0.0 +7.6 +4.8
rhizosphere rhizosphere sample 2; outgrowth in LB -0.2 N.D. -0.2 +7.6 +5.3
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 N.D. -0.1 +7.5 +5.7
root root sample 6; outgrowth in LB +0.3 N.D. -0.3 +8.1 +4.9
rhizosphere rhizosphere sample 6; outgrowth in LB +0.2 N.D. +0.2 +8.0 +4.7
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 N.D. -0.1 +8.7 +4.9
rhizosphere rhizosphere sample 3; outgrowth in LB -0.6 N.D. +0.2 +8.5 +6.3
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