Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS00975 and ABZR87_RS00980 are separated by 264 nucleotidesABZR87_RS00980 and ABZR87_RS00985 are separated by 12 nucleotidesABZR87_RS00985 and ABZR87_RS00990 are separated by 329 nucleotidesABZR87_RS00990 and ABZR87_RS00995 are separated by 13 nucleotides ABZR87_RS00975: ABZR87_RS00975 - molecular chaperone DnaK, at 194,212 to 196,164 _RS00975 ABZR87_RS00980: ABZR87_RS00980 - phospholipase A, at 196,429 to 197,724 _RS00980 ABZR87_RS00985: ABZR87_RS00985 - nucleoside diphosphate kinase regulator, at 197,737 to 198,144 _RS00985 ABZR87_RS00990: ABZR87_RS00990 - thioredoxin family protein, at 198,474 to 198,899 _RS00990 ABZR87_RS00995: ABZR87_RS00995 - nucleotide exchange factor GrpE, at 198,913 to 199,560 _RS00995
Group Condition ABZR87_RS00975 ABZR87_RS00980 ABZR87_RS00985 ABZR87_RS00990 ABZR87_RS00995
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. +0.1 -0.6 -1.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.2 -0.6 -0.1 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 N.D. +0.1 -0.3 -0.6 N.D.
root root sample 6; outgrowth in LB N.D. +0.4 -0.8 -0.3 N.D.
root root EcoFAB sample 2; outgrowth in LB N.D. -0.1 -0.4 +0.2 N.D.
carbon source Lauric (C) N.D. -0.1 +0.3 -0.4 N.D.
phage Ra1_0.1 N.D. +0.2 +0.1 -0.5 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB N.D. -0.1 -0.3 +0.5 N.D.
carbon source Sebacic (C) N.D. -0.2 +0.3 +0.2 N.D.
soil soil EcoFAB sample 1; outgrowth in LB N.D. -0.1 +0.3 +0.3 N.D.
carbon source acetate (C) N.D. +0.1 +0.6 -0.2 N.D.
soil soil EcoFAB sample 2; outgrowth in LB N.D. +0.1 +0.6 -0.2 N.D.
carbon source butyrate (C) N.D. -0.0 +0.6 -0.1 N.D.
carbon source D-Glucose (C) N.D. -0.1 +0.2 +0.4 N.D.
carbon source Azelaic (C) N.D. -0.1 +0.9 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.2 +0.5 +0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.0 +0.1 +0.5 N.D.
carbon source Disodium Glutarate (C) N.D. -0.1 +0.8 -0.0 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB N.D. +0.0 +0.8 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.1 +0.4 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.3 +0.1 +0.6 N.D.
carbon source propionate (C) N.D. +0.1 +0.5 +0.5 N.D.
carbon source Octanoic (C) N.D. +0.1 +1.0 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.1 -0.0 +1.2 N.D.
carbon source Heptanoic (C) N.D. +0.2 +0.6 +0.6 N.D.
carbon source Heptanoic (C) N.D. +0.1 +1.0 +0.4 N.D.
carbon source Octanoic (C) N.D. -0.1 +1.3 +0.3 N.D.
carbon source butyrate (C) N.D. +0.1 +0.7 +0.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.0 +0.9 +0.8 N.D.
carbon source Lauric (C) N.D. +0.3 +1.2 +0.5 N.D.
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