Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS00910 and ABZR87_RS00915 are separated by 72 nucleotidesABZR87_RS00915 and ABZR87_RS00920 are separated by 164 nucleotidesABZR87_RS00920 and ABZR87_RS00925 are separated by 58 nucleotidesABZR87_RS00925 and ABZR87_RS00930 are separated by 51 nucleotides ABZR87_RS00910: ABZR87_RS00910 - hypothetical protein, at 181,584 to 182,033 _RS00910 ABZR87_RS00915: ABZR87_RS00915 - phosphoribosylformylglycinamidine cyclo-ligase, at 182,106 to 183,161 _RS00915 ABZR87_RS00920: ABZR87_RS00920 - AI-2E family transporter, at 183,326 to 184,396 _RS00920 ABZR87_RS00925: ABZR87_RS00925 - DnaA regulatory inactivator Hda, at 184,455 to 185,156 _RS00925 ABZR87_RS00930: ABZR87_RS00930 - HAD family phosphatase, at 185,208 to 185,882 _RS00930
Group Condition ABZR87_RS00910 ABZR87_RS00915 ABZR87_RS00920 ABZR87_RS00925 ABZR87_RS00930
root root EcoFAB sample 2; outgrowth in LB -1.5 N.D. -0.1 N.D. N.D.
root root sample 6; outgrowth in LB -1.8 N.D. +0.3 N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM -1.4 N.D. -0.2 N.D. N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.8 N.D. -0.1 N.D. N.D.
carbon source Disodium Glutarate (C) -1.0 N.D. +0.1 N.D. N.D.
carbon source Protocatechuic Acid (C) -0.9 N.D. -0.0 N.D. N.D.
carbon source L-Glutamic (C) -0.6 N.D. -0.2 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.9 N.D. +0.1 N.D. N.D.
carbon source Azelaic (C) -0.8 N.D. +0.0 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.6 N.D. -0.1 N.D. N.D.
carbon source propionate (C) -0.9 N.D. +0.1 N.D. N.D.
carbon source acetate (C) -0.7 N.D. -0.1 N.D. N.D.
carbon source Lauric (C) -0.7 N.D. -0.0 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 N.D. +0.2 N.D. N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.4 N.D. -0.3 N.D. N.D.
carbon source Sebacic (C) -0.7 N.D. -0.0 N.D. N.D.
carbon source Protocatechuic Acid (C) -0.6 N.D. -0.1 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.5 N.D. -0.1 N.D. N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB -0.7 N.D. +0.1 N.D. N.D.
carbon source Lauric (C) -0.6 N.D. +0.1 N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 N.D. +0.1 N.D. N.D.
carbon source Valeric (C) -0.5 N.D. +0.2 N.D. N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.4 N.D. -0.2 N.D. N.D.
soil soil sample 4; outgrowth in LB +0.4 N.D. -0.2 N.D. N.D.
carbon source Sebacic (C) +0.9 N.D. -0.2 N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 N.D. +0.0 N.D. N.D.
carbon source Lauric (C) -0.5 N.D. +1.3 N.D. N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.8 N.D. -0.1 N.D. N.D.
carbon source Octanoic (C) -0.9 N.D. +2.4 N.D. N.D.
carbon source Octanoic (C) +0.2 N.D. +2.6 N.D. N.D.
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