Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS00700	ABZR87_RS00705	ABZR87_RS00710	ABZR87_RS00715	ABZR87_RS00720
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.1	N.D.	-0.6	-1.1	-0.7
root	root sample 5; outgrowth in LB	+0.1	N.D.	-0.2	-1.1	-1.2
rhizosphere	rhizosphere sample 7; outgrowth in LB	-0.3	N.D.	-0.3	-1.0	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.0	N.D.	-0.2	-1.2	-0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.0	N.D.	-0.4	-0.9	-0.7
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.0	N.D.	-0.1	-0.9	-0.8
root	root sample 6; outgrowth in LB	+0.2	N.D.	-0.4	-0.6	-1.0
soil	soil sample 6; outgrowth in LB	+0.0	N.D.	-0.4	-1.0	-0.2
soil	soil sample 8; outgrowth in LB	-0.1	N.D.	-0.3	-0.6	-0.5
rhizosphere	rhizosphere sample 4; outgrowth in LB	-0.2	N.D.	-0.1	-0.1	-0.9
soil	soil sample 7; outgrowth in LB	+0.0	N.D.	-0.3	-0.7	-0.4
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	+0.0	N.D.	-0.3	-0.5	-0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.0	N.D.	-0.1	-0.6	-0.6
soil	soil sample 2; outgrowth in LB	-0.1	N.D.	-0.4	-0.4	-0.4
soil	soil sample 5; outgrowth in LB	+0.1	N.D.	-0.4	-0.3	-0.6
rhizosphere	rhizosphere sample 6; outgrowth in LB	+0.1	N.D.	-0.1	-0.7	-0.4
soil	soil sample 4; outgrowth in LB	+0.2	N.D.	-0.4	-0.5	-0.4
soil	soil EcoFAB sample 1; outgrowth in LB	+0.4	N.D.	-0.8	-0.5	-0.0
root	root sample 4; outgrowth in LB	+0.0	N.D.	+0.2	-0.7	-0.5
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.1	N.D.	-0.9	+0.2	+0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	N.D.	-0.4	+0.1	-0.4
carbon source	L-Glutamic (C)	+0.3	N.D.	+0.3	-0.4	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	N.D.	-0.4	+0.5	-0.4
carbon source	Octanoic (C)	+0.1	N.D.	-0.3	+0.4	+0.5
carbon source	Octanoic (C)	+0.1	N.D.	-0.2	-0.0	+1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	N.D.	+0.1	+0.5	+1.0
phage	Ra1_0.01	+0.1	N.D.	-0.2	+1.4	+1.3
phage	Ra3_0.1	+0.1	N.D.	-0.0	+1.8	+1.5
phage	Ra1_0.1	+0.1	N.D.	-0.1	+4.2	+4.1
phage	Ra3_1	+0.2	N.D.	-0.0	+4.3	+4.2