Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS00630 and ABZR87_RS00635 are separated by 153 nucleotidesABZR87_RS00635 and ABZR87_RS00640 are separated by 179 nucleotidesABZR87_RS00640 and ABZR87_RS00645 are separated by 49 nucleotidesABZR87_RS00645 and ABZR87_RS00650 are separated by 311 nucleotides ABZR87_RS00630: ABZR87_RS00630 - GntP family permease, at 129,965 to 131,365 _RS00630 ABZR87_RS00635: ABZR87_RS00635 - hypothetical protein, at 131,519 to 131,875 _RS00635 ABZR87_RS00640: ABZR87_RS00640 - MFS transporter, at 132,055 to 133,386 _RS00640 ABZR87_RS00645: ABZR87_RS00645 - oxidoreductase, at 133,436 to 134,188 _RS00645 ABZR87_RS00650: ABZR87_RS00650 - HU family DNA-binding protein, at 134,500 to 134,784 _RS00650
Group Condition ABZR87_RS00630 ABZR87_RS00635 ABZR87_RS00640 ABZR87_RS00645 ABZR87_RS00650
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.3 +0.0 -0.2 -0.9 N.D.
carbon source Sebacic (C) -1.9 +0.3 +0.3 -0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +0.2 -0.1 -0.8 N.D.
carbon source butyrate (C) -0.2 +0.0 +0.1 -0.7 N.D.
root root EcoFAB sample 2; outgrowth in LB +0.3 -0.6 -0.1 -0.1 N.D.
carbon source Heptanoic (C) -0.7 +0.2 +0.2 +0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.6 -0.1 -0.2 -0.2 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.4 +0.0 +0.2 -0.4 N.D.
carbon source Azelaic (C) -0.4 +0.4 +0.3 +0.0 N.D.
carbon source Suberic (C) -0.3 +0.0 -0.1 +0.6 N.D.
carbon source Sebacic (C) -0.5 +0.3 +0.3 +0.1 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 +0.5 -0.1 +0.3 N.D.
root root sample 6; outgrowth in LB -0.6 +0.3 -0.0 +0.7 N.D.
carbon source Dodecandioic (C) -0.3 +0.1 +0.1 +0.5 N.D.
carbon source Dodecandioic (C) -0.3 +0.2 +0.3 +0.3 N.D.
carbon source Protocatechuic Acid (C) -0.3 +0.1 +0.0 +0.6 N.D.
root root sample 4; outgrowth in LB -0.2 -0.1 +0.0 +0.7 N.D.
soil soil sample 3; outgrowth in LB +0.5 +0.0 -0.1 +0.4 N.D.
carbon source Octanoic (C) -0.2 +0.3 +0.2 +0.5 N.D.
carbon source Lauric (C) -0.1 +0.3 +0.3 +0.4 N.D.
carbon source succinate (C) +0.4 +0.1 +0.1 +0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +1.0 +0.1 +0.2 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.8 +0.0 -0.1 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +0.0 -0.1 +0.6 N.D.
soil soil sample 5; outgrowth in LB +0.1 +0.1 +0.1 +0.9 N.D.
nitrogen source nitrogen source nitrate 20mM +0.3 +0.1 +0.1 +0.6 N.D.
carbon source L-Glutamic (C) +0.2 +0.0 +0.1 +0.9 N.D.
carbon source Heptanoic (C) -0.0 +0.2 +0.2 +1.1 N.D.
carbon source Octanoic (C) -0.3 +0.6 +0.8 +0.3 N.D.
root root sample 5; outgrowth in LB -0.1 +0.4 +0.6 +0.7 N.D.
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