Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS00500 and ABZR87_RS00505 are separated by 64 nucleotidesABZR87_RS00505 and ABZR87_RS00510 are separated by 73 nucleotidesABZR87_RS00510 and ABZR87_RS00515 are separated by 9 nucleotidesABZR87_RS00515 and ABZR87_RS00520 are separated by 34 nucleotides ABZR87_RS00500: ABZR87_RS00500 - LysR substrate-binding domain-containing protein, at 102,771 to 103,736 _RS00500 ABZR87_RS00505: ABZR87_RS00505 - LysR family transcriptional regulator, at 103,801 to 104,709 _RS00505 ABZR87_RS00510: ABZR87_RS00510 - MFS transporter, at 104,783 to 106,339 _RS00510 ABZR87_RS00515: ABZR87_RS00515 - DoxX family protein, at 106,349 to 106,759 _RS00515 ABZR87_RS00520: ABZR87_RS00520 - LysR family transcriptional regulator, at 106,794 to 107,678 _RS00520
Group Condition ABZR87_RS00500 ABZR87_RS00505 ABZR87_RS00510 ABZR87_RS00515 ABZR87_RS00520
carbon source Octanoic (C) -0.2 -5.4 -4.8 -0.4 -0.2
carbon source Octanoic (C) -0.1 -5.4 -4.4 -0.6 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.6 -5.0 -5.7 +0.2 +0.9
carbon source Heptanoic (C) -0.0 -1.7 -1.0 -0.1 +0.1
carbon source Heptanoic (C) +0.2 -1.9 -1.0 +0.1 +0.1
root root sample 6; outgrowth in LB -0.2 -0.0 -0.2 -0.2 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 +0.4 +0.3 -0.5 -0.2
root root sample 5; outgrowth in LB -0.1 -0.4 -0.0 +0.3 -0.6
rhizosphere rhizosphere sample 5; outgrowth in LB -0.9 +0.1 -0.1 -0.2 +0.5
soil soil EcoFAB sample 1; outgrowth in LB -0.2 +0.3 +0.0 +0.2 -0.6
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.8 -0.2 +0.2 +0.2 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.4 +0.0 +0.4 -0.7
carbon source adipate (C) +0.5 +0.1 -0.0 -0.2 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.0 +0.1 +0.0 +0.5
rhizosphere rhizosphere sample 4; outgrowth in LB -0.5 +0.3 +0.0 -0.1 +0.5
carbon source Dodecandioic (C) -0.1 -0.5 +0.4 +0.2 +0.3
root root EcoFAB sample 2; outgrowth in LB +0.4 +0.7 -0.0 -0.4 -0.4
carbon source Dodecandioic (C) -0.3 -0.4 +0.4 +0.2 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.3 +0.4 +0.6 -0.7
rhizosphere rhizosphere sample 6; outgrowth in LB -0.4 +0.2 +0.1 +0.1 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.4 +0.1 +0.4 -0.4
carbon source Hexanoic (C) +0.4 -0.5 +0.3 -0.0 +0.4
carbon source Protocatechuic Acid (C) -0.0 -0.2 +0.1 +0.0 +0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.3 +0.3 +0.1 +0.4
carbon source Valeric (C) +0.3 +0.1 +0.3 -0.2 +0.3
carbon source Disodium Glutarate (C) +0.8 +0.1 +0.1 -0.2 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.4 +0.0 -0.2 +0.7
nitrogen source nitrogen source nitrite 0.5mM +0.3 +0.3 +0.1 +0.1 +0.5
carbon source L-Glutamic (C) +0.3 +0.2 +0.3 -0.0 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 +0.3 +0.4 +0.9
remove
ABZR87_RS00500
plot		 remove
ABZR87_RS00505
plot		 remove
ABZR87_RS00510		 remove
ABZR87_RS00515
plot		 remove
ABZR87_RS00520
plot