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Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia sp. UNC404CL21Col
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR87_RS00180 and ABZR87_RS00185 are separated by 15 nucleotides
ABZR87_RS00185 and ABZR87_RS00190 are separated by 56 nucleotides
ABZR87_RS00190 and ABZR87_RS00195 are separated by 2 nucleotides
ABZR87_RS00195 and ABZR87_RS00200 are separated by 20 nucleotides
ABZR87_RS00180: ABZR87_RS00180 - NAD(P)-dependent alcohol dehydrogenase, at 35,209 to 36,225
_RS00180
ABZR87_RS00185: ABZR87_RS00185 - uroporphyrinogen-III C-methyltransferase, at 36,241 to 37,047
_RS00185
ABZR87_RS00190: ABZR87_RS00190 - sulfate adenylyltransferase subunit 1, at 37,104 to 38,411
_RS00190
ABZR87_RS00195: ABZR87_RS00195 - sulfate adenylyltransferase subunit CysD, at 38,414 to 39,364
_RS00195
ABZR87_RS00200: ABZR87_RS00200 - phosphoadenylyl-sulfate reductase, at 39,385 to 40,212
_RS00200
Group
Condition
ABZR87
_RS00180
ABZR87
_RS00185
ABZR87
_RS00190
ABZR87
_RS00195
ABZR87
_RS00200
carbon source
Azelaic (C)
-0.1
-4.3
-4.7
-6.6
-5.8
nitrogen source
nitrogen source nitrate 5mM
+0.1
-5.2
-4.9
-7.6
-3.6
carbon source
Suberic (C)
-0.0
-4.7
-4.7
-6.2
-5.3
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.0
-4.4
-5.1
-5.0
-6.4
carbon source
D-Glucose (C)
+0.4
-5.1
-5.4
-5.2
-5.1
carbon source
Trans-2-methyl-2-butenoic (C)
+0.2
-4.8
-5.0
-5.2
-5.6
nitrogen source
nitrogen source Ammonium chloride 20mM
+0.2
-5.6
-4.8
-3.1
-6.6
nitrogen source
nitrogen source nitrate 20mM
+0.4
-5.5
-4.7
-4.9
-5.3
carbon source
Lauric (C)
+0.2
-4.4
-6.2
-4.7
-4.6
carbon source
Heptanoic (C)
+0.2
-4.6
-6.1
-3.2
-5.6
carbon source
Heptanoic (C)
-0.1
-4.0
-5.1
-4.3
-5.8
carbon source
Protocatechuic Acid (C)
+0.0
-4.6
-5.5
-3.2
-5.7
carbon source
Sebacic (C)
-0.0
-3.8
-5.7
-3.7
-5.5
carbon source
Protocatechuic Acid (C)
+0.1
-5.0
-5.2
-2.7
-5.8
carbon source
Dodecandioic (C)
-0.0
-3.7
-4.9
-4.9
-5.0
carbon source
Pimelic (C)
+0.0
-4.3
-5.6
-3.0
-5.7
carbon source
Carbon source D-Glucose 10 mM
+0.1
-4.3
-4.1
-5.0
-5.2
carbon source
Carbon source D-Glucose 10 mM
+0.0
-4.8
-5.1
-4.5
-4.1
carbon source
Glycerol (C)
+0.1
-4.7
-5.0
-3.6
-5.2
carbon source
Sebacic (C)
-0.2
-3.8
-4.9
-3.8
-5.7
carbon source
Glycerol (C)
+0.1
-5.1
-5.0
-3.4
-4.9
nitrogen source
nitrogen source nitrate 20mM
-0.2
-4.4
-5.5
-3.9
-4.1
carbon source
Octanoic (C)
-0.0
-3.6
-4.5
-6.1
-3.8
nitrogen source
nitrogen source nitrate 5mM
+0.1
-3.6
-4.3
-4.9
-5.0
carbon source
Protocatechuic Acid (C)
+0.2
-4.4
-5.5
-3.8
-4.3
carbon source
D-Glucose (C)
+0.5
-4.6
-5.3
-3.1
-5.2
carbon source
Dodecandioic (C)
-0.1
-3.8
-5.0
-3.8
-4.9
carbon source
Trans-2-methyl-2-butenoic (C)
-0.2
-4.7
-5.3
-3.4
-4.1
carbon source
Beta-alanine (C)
+0.3
-3.4
-5.2
-4.0
-4.8
carbon source
Pimelic (C)
+0.3
-4.4
-5.0
-4.3
-3.6
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