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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS22170 and ABZR86_RS22175 are separated by 153 nucleotides
ABZR86_RS22175 and ABZR86_RS22180 are separated by 46 nucleotides
ABZR86_RS22180 and ABZR86_RS22185 are separated by 66 nucleotides
ABZR86_RS22185 and ABZR86_RS22190 are separated by 865 nucleotides
ABZR86_RS22170: ABZR86_RS22170 - catalase, at 395,486 to 397,021
_RS22170
ABZR86_RS22175: ABZR86_RS22175 - AraC family transcriptional regulator, at 397,175 to 397,999
_RS22175
ABZR86_RS22180: ABZR86_RS22180 - DMT family transporter, at 398,046 to 399,020
_RS22180
ABZR86_RS22185: ABZR86_RS22185 - NUDIX hydrolase, at 399,087 to 399,653
_RS22185
ABZR86_RS22190: ABZR86_RS22190 - hypothetical protein, at 400,519 to 400,878
_RS22190
Group
Condition
ABZR86
_RS22170
ABZR86
_RS22175
ABZR86
_RS22180
ABZR86
_RS22185
ABZR86
_RS22190
stress
Zinc 2.5 mM
+0.2
+0.0
+0.0
+0.4
-5.4
carbon source
D-Glucose (C)
+0.0
-0.3
-0.1
-0.7
-1.4
lb
LB
+0.1
-0.9
-0.6
-0.4
-0.4
carbon source
pyruvate (C)
-0.2
+0.1
+0.1
-0.5
-1.7
carbon source
D-Fructose (C)
+0.1
+0.3
-0.2
-1.6
-0.8
stress
Thallium(I) acetate 0.016 mg/ml
+1.7
-1.2
-0.7
+0.0
-1.7
carbon source
a-Cyclodextrin (C)
-0.1
+0.1
-0.1
-0.5
-1.3
stress
Ceftazidime 0.05 mg/ml
+0.1
-0.3
+0.0
+0.1
-1.8
carbon source
D-Cellobiose (C)
-0.2
-0.3
-0.5
+0.0
-0.7
nitrogen source
L-Lysine (N)
-0.3
-0.4
-0.5
-0.1
-0.3
nitrogen source
Glucuronamide (N)
-0.0
-0.3
+0.1
+0.4
-1.7
carbon source
L-Proline (C)
-0.2
-0.2
-0.2
+0.2
-0.7
carbon source
L-Alanine (C)
+1.1
-1.0
-1.6
+0.6
-0.3
carbon source
D-Maltose (C)
-0.1
-0.3
-0.1
+0.3
-0.9
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.3
+0.2
-0.8
+0.1
carbon source
D-Cellobiose (C)
-0.1
-0.2
-0.3
+0.8
-1.1
carbon source
L-Alanine (C)
+1.2
-1.2
-1.5
+0.6
+0.2
carbon source
NAG (C)
+0.1
+0.1
-0.6
+0.3
-0.5
stress
Cisplatin 0.0032 mg/ml
-0.6
+0.3
-0.0
+0.3
-0.5
stress
Carbenicillin 0.04 mg/ml
+0.1
-0.0
+0.2
+0.3
-0.9
carbon source
a-Cyclodextrin (C)
-0.0
-0.2
-0.4
+0.3
+0.5
stress
A22 0.01 mg/ml
-0.0
+0.3
+0.1
+0.6
-0.8
stress
Chloramphenicol 0.008 mg/ml
+0.0
-0.3
-0.1
-0.2
+0.8
nitrogen source
L-Isoleucine (N)
+0.1
-0.4
+0.2
-0.1
+0.7
stress
Nalidixic 0.08 mg/ml
+0.2
+0.5
+0.2
+0.7
-0.8
stress
A22 0.02 mg/ml
-0.2
-0.3
+0.2
+0.1
+1.0
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.1
-0.1
+0.3
+0.5
+0.4
stress
Fusidic 0.4 mg/ml
+0.0
-0.2
-0.1
+0.7
+0.6
lb
LB
-0.0
-0.2
+0.1
+0.8
+0.5
stress
Thallium(I) acetate 0.008 mg/ml
+2.2
-1.4
-1.7
+1.4
+0.7
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