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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS21515 and ABZR86_RS21520 are separated by 64 nucleotides
ABZR86_RS21520 and ABZR86_RS21525 are separated by 202 nucleotides
ABZR86_RS21525 and ABZR86_RS21530 are separated by 31 nucleotides
ABZR86_RS21530 and ABZR86_RS21535 are separated by 1 nucleotides
ABZR86_RS21515: ABZR86_RS21515 - phosphodiester glycosidase family protein, at 268,933 to 269,682
_RS21515
ABZR86_RS21520: ABZR86_RS21520 - penicillin acylase family protein, at 269,747 to 272,167
_RS21520
ABZR86_RS21525: ABZR86_RS21525 - DUF4019 domain-containing protein, at 272,370 to 272,864
_RS21525
ABZR86_RS21530: ABZR86_RS21530 - type II toxin-antitoxin system HipA family toxin, at 272,896 to 274,206
_RS21530
ABZR86_RS21535: ABZR86_RS21535 - hypothetical protein, at 274,208 to 274,576
_RS21535
Group
Condition
ABZR86
_RS21515
ABZR86
_RS21520
ABZR86
_RS21525
ABZR86
_RS21530
ABZR86
_RS21535
carbon source
L-Alanine (C)
-2.7
+0.1
+0.2
-0.0
N.D.
carbon source
L-Alanine (C)
-2.4
-0.1
+0.0
-0.0
N.D.
stress
Tetracycline 0.024 mg/ml
-1.5
+0.0
-0.2
+0.0
N.D.
stress
Spectinomycin 0.04 mg/ml
-1.3
-0.0
+0.2
+0.0
N.D.
carbon source
L-Proline (C)
-1.1
+0.1
+0.0
-0.1
N.D.
carbon source
pyruvate (C)
-0.9
+0.0
-0.1
-0.0
N.D.
carbon source
D-Galactose (C)
-1.0
+0.2
-0.1
+0.0
N.D.
stress
Chloramphenicol 0.012 mg/ml
-0.2
-0.0
-0.5
-0.1
N.D.
stress
Zinc 2.5 mM
-0.6
+0.3
-0.5
-0.0
N.D.
carbon source
D-Maltose (C)
-0.3
+0.0
-0.5
-0.0
N.D.
carbon source
pyruvate (C)
-0.7
-0.1
+0.1
-0.2
N.D.
stress
perchlorate 75 mM
-0.4
+0.0
-0.2
-0.1
N.D.
carbon source
a-Cyclodextrin (C)
-0.6
-0.1
+0.1
-0.1
N.D.
carbon source
D-Fructose (C)
-0.6
-0.0
-0.1
+0.1
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.1
-0.3
-0.1
N.D.
carbon source
L-Proline (C)
-0.8
+0.2
+0.1
+0.1
N.D.
stress
Nalidixic 0.08 mg/ml
+0.0
+0.1
-0.6
-0.0
N.D.
stress
Sisomicin 0.016 mg/ml
-0.4
+0.1
-0.2
+0.0
N.D.
nitrogen source
L-Leucine (N)
-0.3
-0.1
+0.1
-0.1
N.D.
stress
Fusidic 0.4 mg/ml
-0.5
+0.2
-0.2
+0.1
N.D.
carbon source
D-Fructose (C)
-0.3
+0.3
-0.4
+0.0
N.D.
stress
Fusidic 0.2 mg/ml
-0.4
-0.0
+0.1
+0.1
N.D.
lb
LB
+0.3
-0.2
-0.4
+0.1
N.D.
carbon source
D-Glucose (C)
-0.4
+0.1
+0.3
-0.0
N.D.
nitrogen source
nitrate (N)
-0.3
-0.1
+0.3
+0.0
N.D.
carbon source
a-Cyclodextrin (C)
-0.5
+0.1
+0.3
+0.0
N.D.
nitrogen source
L-Isoleucine (N)
-0.3
-0.0
+0.3
-0.1
N.D.
carbon source
D-Maltose (C)
-0.3
+0.2
+0.1
-0.0
N.D.
nitrogen source
L-Asparagine (N)
-0.2
-0.4
+0.6
+0.0
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
+0.3
-0.1
+0.2
+0.1
N.D.
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