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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS21495 and ABZR86_RS21500 are separated by 245 nucleotides
ABZR86_RS21500 and ABZR86_RS21505 overlap by 4 nucleotides
ABZR86_RS21505 and ABZR86_RS21510 are separated by 262 nucleotides
ABZR86_RS21510 and ABZR86_RS21515 are separated by 259 nucleotides
ABZR86_RS21495: ABZR86_RS21495 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 265,720 to 266,934
_RS21495
ABZR86_RS21500: ABZR86_RS21500 - NUDIX domain-containing protein, at 267,180 to 267,587
_RS21500
ABZR86_RS21505: ABZR86_RS21505 - 8-oxo-dGTP diphosphatase, at 267,584 to 268,072
_RS21505
ABZR86_RS21510: ABZR86_RS21510 - hypothetical protein, at 268,335 to 268,673
_RS21510
ABZR86_RS21515: ABZR86_RS21515 - phosphodiester glycosidase family protein, at 268,933 to 269,682
_RS21515
Group
Condition
ABZR86
_RS21495
ABZR86
_RS21500
ABZR86
_RS21505
ABZR86
_RS21510
ABZR86
_RS21515
carbon source
L-Alanine (C)
+0.3
-0.4
-0.6
+0.0
-2.4
carbon source
L-Alanine (C)
+0.3
+0.3
-0.3
+0.1
-2.7
stress
Fusidic 0.4 mg/ml
-0.3
+0.1
-2.0
+0.6
-0.5
stress
Tetracycline 0.024 mg/ml
-0.1
-0.1
-0.2
+0.2
-1.5
carbon source
D-Galactose (C)
-0.4
-0.2
-0.2
+0.3
-1.0
stress
Spectinomycin 0.04 mg/ml
+0.0
+0.2
-0.4
+0.2
-1.3
carbon source
pyruvate (C)
+0.1
-0.6
-0.1
+0.3
-0.9
carbon source
L-Proline (C)
-0.1
-0.2
-0.1
+0.1
-1.1
carbon source
NAG (C)
-0.1
-0.8
-0.2
+0.1
-0.1
nitrogen source
L-Lysine (N)
-0.3
-0.1
-0.4
-0.3
+0.1
carbon source
D-Fructose (C)
+0.3
-0.5
-0.0
-0.1
-0.6
stress
perchlorate 75 mM
+0.1
-0.3
+0.0
-0.3
-0.4
carbon source
D-Maltose (C)
+0.2
-0.5
-0.0
-0.2
-0.3
carbon source
pyruvate (C)
+0.2
-0.7
+0.0
+0.3
-0.7
carbon source
L-Proline (C)
+0.0
-0.0
-0.1
+0.2
-0.8
carbon source
D-Glucose (C)
+0.1
-0.5
+0.2
-0.1
-0.4
carbon source
a-Cyclodextrin (C)
+0.3
-0.4
-0.2
+0.0
-0.5
stress
sodium fluoride 40 mM
+0.1
-0.9
+0.2
-0.1
+0.0
carbon source
D-Cellobiose (C)
+0.0
-0.7
-0.0
+0.1
-0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.1
-0.6
-0.1
-0.3
+0.2
stress
Fusidic 0.2 mg/ml
-0.1
+0.2
-0.5
+0.1
-0.4
nitrogen source
L-Asparagine (N)
-0.2
+1.0
-0.9
-0.3
-0.2
carbon source
a-Cyclodextrin (C)
+0.2
+0.1
-0.1
-0.0
-0.6
stress
Sisomicin 0.016 mg/ml
+0.3
-0.0
-0.2
-0.1
-0.4
stress
Zinc 2.5 mM
+0.2
-0.4
+0.3
+0.2
-0.6
carbon source
D-Glucose (C)
+0.3
-0.4
-0.2
+0.1
-0.2
stress
Nalidixic 0.04 mg/ml
-0.3
+0.4
+0.3
-0.4
-0.1
stress
Nalidixic 0.02 mg/ml
-0.0
+0.5
+0.2
-0.1
-0.3
carbon source
D-Fructose (C)
+0.6
+0.5
+0.1
-0.0
-0.3
lb
LB
+0.4
+0.7
+0.2
+0.4
+0.3
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ABZR86_RS21505
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