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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS21405 and ABZR86_RS21410 overlap by 4 nucleotides
ABZR86_RS21410 and ABZR86_RS21415 are separated by 223 nucleotides
ABZR86_RS21415 and ABZR86_RS21420 are separated by 159 nucleotides
ABZR86_RS21420 and ABZR86_RS21425 are separated by 13 nucleotides
ABZR86_RS21405: ABZR86_RS21405 - biotin--protein ligase, at 247,825 to 248,115
_RS21405
ABZR86_RS21410: ABZR86_RS21410 - biotin/lipoate A/B protein ligase family protein, at 248,112 to 248,888
_RS21410
ABZR86_RS21415: ABZR86_RS21415 - hypothetical protein, at 249,112 to 249,600
_RS21415
ABZR86_RS21420: ABZR86_RS21420 - alpha/beta fold hydrolase, at 249,760 to 250,602
_RS21420
ABZR86_RS21425: ABZR86_RS21425 - EamA family transporter, at 250,616 to 250,981
_RS21425
Group
Condition
ABZR86
_RS21405
ABZR86
_RS21410
ABZR86
_RS21415
ABZR86
_RS21420
ABZR86
_RS21425
stress
Tetracycline 0.024 mg/ml
+0.2
+0.1
-0.1
-4.0
N.D.
stress
Nalidixic 0.01 mg/ml
-0.1
-0.2
+0.1
-3.3
N.D.
stress
Nalidixic 0.04 mg/ml
+0.0
+0.1
-0.2
-3.1
N.D.
stress
Tetracycline 0.012 mg/ml
-0.0
+0.1
+0.1
-3.0
N.D.
stress
Fusidic 0.2 mg/ml
+0.1
+0.1
-0.0
-2.8
N.D.
stress
Nalidixic 0.02 mg/ml
+0.1
+0.1
+0.1
-2.8
N.D.
stress
Nalidixic 0.08 mg/ml
-0.0
-0.1
-0.1
-2.3
N.D.
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.3
+0.0
-0.0
-2.1
N.D.
carbon source
D-Galactose (C)
+0.1
-0.1
+0.0
-2.4
N.D.
stress
Zinc 2.5 mM
+0.4
-0.1
-0.1
-2.2
N.D.
stress
Chloramphenicol 0.012 mg/ml
+0.0
-0.3
+0.1
-1.8
N.D.
stress
Fusidic 0.4 mg/ml
+0.2
+0.2
-0.1
-2.0
N.D.
carbon source
NAG (C)
+0.2
-0.0
-0.1
-1.7
N.D.
stress
Sisomicin 0.016 mg/ml
-0.2
+0.1
-0.1
-1.3
N.D.
carbon source
NAG (C)
+0.0
+0.0
-0.1
-1.2
N.D.
stress
Chloramphenicol 0.008 mg/ml
-0.0
-0.1
-0.1
-1.0
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.1
+0.1
-0.1
-1.3
N.D.
stress
Ceftazidime 0.05 mg/ml
-0.2
-0.3
-0.1
-0.6
N.D.
stress
perchlorate 75 mM
+0.0
+0.0
-0.0
-1.1
N.D.
stress
nitrate 200 mM
-0.2
-0.2
-0.1
-0.5
N.D.
lb
LB
+0.1
-0.1
+0.1
-0.5
N.D.
stress
A22 0.02 mg/ml
+0.2
+0.0
+0.1
-0.5
N.D.
carbon source
a-Cyclodextrin (C)
+0.1
-0.3
-0.0
+0.3
N.D.
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.2
+0.1
+0.5
N.D.
carbon source
pyruvate (C)
+0.4
-0.2
+0.1
+0.2
N.D.
carbon source
L-Alanine (C)
+0.4
+0.1
-0.1
+0.3
N.D.
stress
Chlorite 0.32 mM
+0.1
+0.1
+0.1
+0.5
N.D.
carbon source
D-Fructose (C)
+0.4
-0.4
-0.3
+1.9
N.D.
carbon source
D-Fructose (C)
-0.1
-0.1
-0.3
+2.1
N.D.
stress
Spectinomycin 0.04 mg/ml
+0.5
+0.1
-0.2
+8.7
N.D.
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