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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS20995 and ABZR86_RS21000 are separated by 156 nucleotides
ABZR86_RS21000 and ABZR86_RS21005 are separated by 190 nucleotides
ABZR86_RS21005 and ABZR86_RS21010 are separated by 172 nucleotides
ABZR86_RS21010 and ABZR86_RS21015 are separated by 4 nucleotides
ABZR86_RS20995: ABZR86_RS20995 - TetR/AcrR family transcriptional regulator, at 172,121 to 172,750
_RS20995
ABZR86_RS21000: ABZR86_RS21000 - hypothetical protein, at 172,907 to 173,395
_RS21000
ABZR86_RS21005: ABZR86_RS21005 - omptin family outer membrane protease, at 173,586 to 174,575
_RS21005
ABZR86_RS21010: ABZR86_RS21010 - hypothetical protein, at 174,748 to 175,326
_RS21010
ABZR86_RS21015: ABZR86_RS21015 - SDR family oxidoreductase, at 175,331 to 176,134
_RS21015
Group
Condition
ABZR86
_RS20995
ABZR86
_RS21000
ABZR86
_RS21005
ABZR86
_RS21010
ABZR86
_RS21015
carbon source
pyruvate (C)
-0.4
-0.4
+0.0
-0.3
-0.1
carbon source
L-Proline (C)
-0.2
-0.4
-0.1
-0.4
+0.1
carbon source
D-Cellobiose (C)
-0.1
-0.5
-0.1
-0.1
-0.1
carbon source
L-Alanine (C)
-0.4
-0.4
-0.0
+0.0
-0.1
carbon source
NAG (C)
-0.2
-0.1
-0.0
-0.3
-0.1
stress
perchlorate 75 mM
-0.1
-0.1
-0.0
-0.4
-0.1
stress
Paraquat dichloride 0.1 mg/ml
-0.5
-0.0
-0.1
-0.0
-0.1
stress
Nalidixic 0.01 mg/ml
-0.3
-0.3
+0.1
+0.1
-0.1
stress
Chloramphenicol 0.008 mg/ml
-0.2
-0.3
+0.0
-0.1
+0.0
carbon source
a-Cyclodextrin (C)
-0.1
-0.5
-0.1
-0.1
+0.1
carbon source
D-Glucose (C)
-0.5
+0.1
-0.1
-0.0
+0.1
nitrogen source
L-Proline (N)
-0.1
-0.4
-0.1
+0.1
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.4
+0.1
-0.0
+0.2
-0.2
stress
nitrate 200 mM
-0.2
+0.1
-0.1
+0.1
-0.2
stress
Nalidixic 0.08 mg/ml
-0.2
-0.2
+0.0
-0.1
+0.2
carbon source
D-Galactose (C)
-0.4
+0.1
+0.0
+0.1
-0.1
carbon source
D-Maltose (C)
-0.3
-0.1
-0.0
+0.0
+0.2
carbon source
a-Cyclodextrin (C)
-0.3
-0.2
+0.1
+0.1
+0.2
stress
A22 0.01 mg/ml
-0.2
-0.2
-0.0
+0.2
+0.1
nitrogen source
L-Leucine (N)
-0.0
-0.4
+0.0
+0.3
+0.0
stress
Tetracycline 0.024 mg/ml
-0.1
-0.2
-0.1
+0.3
+0.0
lb
LB
-0.1
-0.0
-0.1
+0.3
-0.1
stress
Chloramphenicol 0.012 mg/ml
-0.2
-0.0
-0.1
+0.1
+0.4
stress
Chloride 250 mM
+0.1
-0.2
-0.1
+0.1
+0.2
lb
LB
+0.5
+0.2
-0.0
-0.1
-0.3
stress
Spectinomycin 0.04 mg/ml
-0.0
+0.3
-0.2
+0.6
-0.4
stress
Fusidic 0.4 mg/ml
+0.1
+0.0
-0.0
+0.4
-0.1
lb
LB
+0.3
+0.1
-0.0
+0.2
-0.2
nitrogen source
L-Asparagine (N)
+0.1
+0.3
+0.2
-0.2
+0.4
nitrogen source
L-Lysine (N)
+0.2
+0.1
+0.1
+0.3
+0.3
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