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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS20940 and ABZR86_RS20945 are separated by 684 nucleotides
ABZR86_RS20945 and ABZR86_RS20950 are separated by 84 nucleotides
ABZR86_RS20950 and ABZR86_RS20955 are separated by 96 nucleotides
ABZR86_RS20955 and ABZR86_RS20960 are separated by 35 nucleotides
ABZR86_RS20940: ABZR86_RS20940 - hypothetical protein, at 156,331 to 156,579
_RS20940
ABZR86_RS20945: ABZR86_RS20945 - response regulator transcription factor, at 157,264 to 157,905
_RS20945
ABZR86_RS20950: ABZR86_RS20950 - transporter substrate-binding domain-containing protein, at 157,990 to 162,255
_RS20950
ABZR86_RS20955: ABZR86_RS20955 - hypothetical protein, at 162,352 to 163,116
_RS20955
ABZR86_RS20960: ABZR86_RS20960 - hypothetical protein, at 163,152 to 164,753
_RS20960
Group
Condition
ABZR86
_RS20940
ABZR86
_RS20945
ABZR86
_RS20950
ABZR86
_RS20955
ABZR86
_RS20960
stress
perchlorate 75 mM
-0.7
-0.2
+0.1
-0.1
+0.1
nitrogen source
L-Arginine (N)
-0.5
-0.0
+0.1
-0.2
-0.1
stress
A22 0.01 mg/ml
-0.2
+0.1
-0.1
-0.2
-0.3
stress
Tetracycline 0.024 mg/ml
-0.3
+0.2
+0.1
-0.4
-0.1
stress
Ceftazidime 0.1 mg/ml
-0.1
-0.0
+0.1
-0.2
-0.2
stress
Fusidic 0.2 mg/ml
+0.1
+0.0
-0.0
-0.4
-0.2
nitrogen source
L-Asparagine (N)
+0.4
-0.1
-0.1
+0.1
-0.6
carbon source
NAG (C)
+0.2
-0.2
+0.2
-0.2
-0.2
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.3
+0.1
-0.1
-0.6
carbon source
a-Cyclodextrin (C)
+0.4
-0.2
-0.3
+0.1
-0.2
stress
Paraquat dichloride 0.1 mg/ml
-0.2
-0.2
-0.1
-0.1
+0.5
stress
Fusidic 0.4 mg/ml
+0.1
+0.3
-0.2
+0.1
-0.4
stress
sodium fluoride 60 mM
+0.1
+0.0
+0.1
+0.1
-0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.1
+0.1
-0.3
+0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
+0.1
+0.1
-0.1
+0.3
carbon source
D-Maltose (C)
+0.3
-0.1
+0.0
+0.0
-0.2
stress
Zinc 2.5 mM
-0.3
+0.2
+0.2
+0.2
-0.2
carbon source
D-Cellobiose (C)
+0.2
+0.3
+0.1
-0.1
-0.2
stress
Nalidixic 0.01 mg/ml
+0.4
+0.1
+0.0
-0.0
-0.1
stress
Carbenicillin 0.02 mg/ml
+0.3
+0.2
+0.1
+0.0
-0.2
carbon source
D-Fructose (C)
+0.4
-0.1
+0.0
+0.2
-0.1
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
+0.2
+0.0
+0.3
-0.1
carbon source
L-Alanine (C)
+0.2
-0.1
+0.1
+0.1
+0.2
stress
nitrite 6 mM
+0.3
-0.1
-0.1
+0.1
+0.3
stress
A22 0.02 mg/ml
+0.5
+0.0
+0.0
+0.1
-0.1
carbon source
D-Fructose (C)
+0.5
+0.2
+0.2
-0.1
-0.1
lb
LB
-0.1
-0.2
+0.2
+0.1
+0.6
stress
Nalidixic 0.08 mg/ml
+0.2
+0.4
+0.0
-0.1
+0.2
nitrogen source
nitrate (N)
+0.2
+0.2
+0.1
-0.1
+0.5
stress
Chloramphenicol 0.008 mg/ml
+0.2
+0.1
+0.1
+0.1
+0.5
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ABZR86_RS20950
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