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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS20355 and ABZR86_RS20360 are separated by 121 nucleotides
ABZR86_RS20360 and ABZR86_RS20365 overlap by 4 nucleotides
ABZR86_RS20365 and ABZR86_RS20370 are separated by 88 nucleotides
ABZR86_RS20370 and ABZR86_RS20375 are separated by 20 nucleotides
ABZR86_RS20355: ABZR86_RS20355 - DUF3313 domain-containing protein, at 8,635 to 9,300
_RS20355
ABZR86_RS20360: ABZR86_RS20360 - ATP-binding protein, at 9,422 to 10,579
_RS20360
ABZR86_RS20365: ABZR86_RS20365 - response regulator transcription factor, at 10,576 to 11,238
_RS20365
ABZR86_RS20370: ABZR86_RS20370 - alpha/beta hydrolase, at 11,327 to 12,127
_RS20370
ABZR86_RS20375: ABZR86_RS20375 - nitrilase-related carbon-nitrogen hydrolase, at 12,148 to 13,575
_RS20375
Group
Condition
ABZR86
_RS20355
ABZR86
_RS20360
ABZR86
_RS20365
ABZR86
_RS20370
ABZR86
_RS20375
carbon source
D-Fructose (C)
+0.2
-0.5
+0.1
-0.7
+0.0
carbon source
L-Alanine (C)
+0.1
-0.5
+0.1
-0.6
-0.0
stress
sodium fluoride 60 mM
-0.2
-0.1
-0.1
-0.7
+0.2
stress
Sisomicin 0.016 mg/ml
-0.5
-0.6
-0.1
+0.4
-0.1
carbon source
L-Proline (C)
+0.2
-0.7
-0.0
-0.3
+0.2
carbon source
D-Fructose (C)
-0.3
+0.9
+0.0
-1.3
+0.2
carbon source
pyruvate (C)
-0.1
+0.2
-0.0
-0.9
+0.2
carbon source
D-Glucose (C)
-0.2
+0.5
-0.1
-0.5
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.3
-0.5
+0.1
+0.4
-0.0
stress
A22 0.02 mg/ml
-0.2
-0.5
+0.1
+0.4
+0.1
stress
Ceftazidime 0.05 mg/ml
-0.2
-0.4
+0.0
+0.3
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.4
-0.3
+0.2
+0.2
+0.2
stress
perchlorate 75 mM
-0.0
-0.7
-0.0
+0.7
+0.0
carbon source
NAG (C)
+0.4
-0.3
+0.1
-0.2
+0.1
stress
Spectinomycin 0.04 mg/ml
-0.4
-0.5
-0.1
+0.8
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.3
-0.5
+0.0
+0.8
+0.2
stress
Fusidic 0.4 mg/ml
-0.1
+0.2
+0.5
-0.4
+0.0
lb
LB
-0.3
-0.2
+0.2
+0.5
+0.1
stress
Nalidixic 0.08 mg/ml
+0.2
-1.2
+0.3
+1.2
-0.2
stress
Tetracycline 0.012 mg/ml
-0.2
+0.0
+0.1
+0.6
-0.2
lb
LB
-0.1
+0.4
-0.4
+0.3
+0.2
stress
sodium fluoride 40 mM
-0.2
-0.3
-0.1
+0.9
+0.1
stress
Tetracycline 0.024 mg/ml
-0.2
+0.1
-0.2
+0.4
+0.5
nitrogen source
nitrate (N)
-0.1
+0.7
-0.1
-0.1
+0.3
stress
Chloramphenicol 0.008 mg/ml
-0.3
-0.1
+0.3
+0.7
+0.1
stress
Carbenicillin 0.02 mg/ml
-0.3
-0.0
+0.1
+0.8
+0.2
stress
Carbenicillin 0.04 mg/ml
-0.3
+0.4
+0.2
+0.4
+0.1
nitrogen source
L-Lysine (N)
-0.2
-0.3
+0.1
+1.1
+0.1
nitrogen source
L-Asparagine (N)
-0.0
+0.1
+0.1
+0.8
-0.2
nitrogen source
L-Proline (N)
-0.2
+0.4
+0.2
+1.1
+0.2
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