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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS20080 and ABZR86_RS20085 are separated by 18 nucleotides
ABZR86_RS20085 and ABZR86_RS20090 are separated by 53 nucleotides
ABZR86_RS20090 and ABZR86_RS20095 are separated by 68 nucleotides
ABZR86_RS20095 and ABZR86_RS20100 are separated by 41 nucleotides
ABZR86_RS20080: ABZR86_RS20080 - flagellar basal body rod protein FlgC, at 510,111 to 510,530
_RS20080
ABZR86_RS20085: ABZR86_RS20085 - flagellar hook capping FlgD N-terminal domain-containing protein, at 510,549 to 511,202
_RS20085
ABZR86_RS20090: ABZR86_RS20090 - flagellar hook protein FlgE, at 511,256 to 512,476
_RS20090
ABZR86_RS20095: ABZR86_RS20095 - flagellar basal-body rod protein FlgF, at 512,545 to 513,285
_RS20095
ABZR86_RS20100: ABZR86_RS20100 - flagellar basal-body rod protein FlgG, at 513,327 to 514,112
_RS20100
Group
Condition
ABZR86
_RS20080
ABZR86
_RS20085
ABZR86
_RS20090
ABZR86
_RS20095
ABZR86
_RS20100
stress
A22 0.02 mg/ml
-0.2
+0.0
+0.1
+0.1
-0.8
stress
Ceftazidime 0.05 mg/ml
-0.4
-0.1
+0.1
+0.0
-0.4
lb
LB
-0.5
-0.3
+0.3
+0.1
-0.3
stress
Paraquat dichloride 0.05 mg/ml
-0.6
+0.0
-0.0
+0.1
-0.1
carbon source
L-Proline (C)
-0.6
-0.2
+0.1
+0.2
-0.0
stress
D-Cycloserine 0.032 mg/ml
-0.5
+0.0
+0.1
+0.2
-0.4
carbon source
D-Glucose (C)
-0.6
-0.0
+0.3
+0.1
-0.2
lb
LB
+0.5
-0.6
+0.0
+0.0
-0.1
lb
LB
-0.5
+0.3
+0.1
-0.1
+0.1
carbon source
L-Alanine (C)
-0.7
-0.0
+0.1
+0.2
+0.2
stress
perchlorate 75 mM
-0.3
+0.3
+0.0
+0.3
-0.2
carbon source
pyruvate (C)
+0.2
+0.1
+0.0
-0.4
+0.5
carbon source
D-Glucose (C)
-0.3
-0.0
+0.1
+0.1
+0.5
stress
Nalidixic 0.02 mg/ml
+0.1
+0.3
+0.1
+0.3
-0.2
carbon source
a-Cyclodextrin (C)
+0.3
-0.2
+0.1
+0.2
+0.3
stress
Chloramphenicol 0.008 mg/ml
-0.3
+0.4
+0.1
+0.4
+0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.2
+0.4
+0.2
+0.2
-0.0
carbon source
D-Maltose (C)
+0.2
-0.1
+0.1
+0.4
+0.5
stress
Spectinomycin 0.04 mg/ml
-0.3
+0.5
+0.1
+0.4
+0.4
carbon source
D-Cellobiose (C)
+0.5
+0.1
-0.0
+0.2
+0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.3
+0.3
+0.1
+0.1
+0.2
carbon source
D-Fructose (C)
+0.3
+0.4
+0.3
-0.1
+0.2
carbon source
D-Fructose (C)
-0.6
+0.0
+0.3
+0.3
+1.0
stress
Sisomicin 0.016 mg/ml
+0.6
+0.0
+0.1
+0.5
-0.0
nitrogen source
Glucuronamide (N)
+0.4
+0.4
+0.2
+0.0
+0.2
carbon source
a-Cyclodextrin (C)
-0.1
+0.2
+0.4
+0.2
+0.6
stress
Tetracycline 0.012 mg/ml
+0.3
+0.5
+0.2
+0.2
+0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.3
+0.2
+0.4
+0.6
+0.3
nitrogen source
L-Isoleucine (N)
+0.6
+0.3
+0.3
+0.6
+0.2
nitrogen source
L-Asparagine (N)
+0.7
+1.0
+0.2
+0.8
+0.9
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