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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS20065 and ABZR86_RS20070 are separated by 153 nucleotides
ABZR86_RS20070 and ABZR86_RS20075 are separated by 307 nucleotides
ABZR86_RS20075 and ABZR86_RS20080 overlap by 1 nucleotides
ABZR86_RS20080 and ABZR86_RS20085 are separated by 18 nucleotides
ABZR86_RS20065: ABZR86_RS20065 - filamentous hemagglutinin N-terminal domain-containing protein, at 505,977 to 507,551
_RS20065
ABZR86_RS20070: ABZR86_RS20070 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 507,705 to 509,405
_RS20070
ABZR86_RS20075: ABZR86_RS20075 - flagellar basal body rod protein FlgB, at 509,713 to 510,111
_RS20075
ABZR86_RS20080: ABZR86_RS20080 - flagellar basal body rod protein FlgC, at 510,111 to 510,530
_RS20080
ABZR86_RS20085: ABZR86_RS20085 - flagellar hook capping FlgD N-terminal domain-containing protein, at 510,549 to 511,202
_RS20085
Group
Condition
ABZR86
_RS20065
ABZR86
_RS20070
ABZR86
_RS20075
ABZR86
_RS20080
ABZR86
_RS20085
stress
Paraquat dichloride 0.05 mg/ml
+0.0
-0.0
-0.3
-0.6
+0.0
lb
LB
-0.1
-0.2
-0.3
+0.5
-0.6
nitrogen source
L-Leucine (N)
-0.0
+0.1
-0.7
-0.4
+0.2
carbon source
D-Galactose (C)
-0.1
+0.0
+0.1
-0.3
-0.4
carbon source
L-Proline (C)
+0.1
+0.2
-0.1
-0.6
-0.2
carbon source
D-Glucose (C)
-0.1
+0.2
+0.1
-0.6
-0.0
carbon source
D-Fructose (C)
-0.1
+0.2
+0.3
-0.6
+0.0
nitrogen source
nitrate (N)
-0.0
-0.0
-0.5
+0.1
+0.2
carbon source
L-Alanine (C)
+0.1
+0.2
+0.3
-0.7
-0.0
lb
LB
+0.1
+0.1
+0.1
-0.5
+0.3
stress
Chloramphenicol 0.008 mg/ml
+0.0
+0.0
-0.2
-0.3
+0.4
carbon source
D-Cellobiose (C)
+0.1
+0.1
-0.3
+0.4
-0.2
nitrogen source
L-Proline (N)
-0.2
-0.0
-0.2
+0.3
+0.1
stress
Sisomicin 0.016 mg/ml
+0.0
-0.2
-0.3
+0.6
+0.0
carbon source
L-Proline (C)
+0.1
+0.2
+0.4
-0.4
-0.1
nitrogen source
L-Lysine (N)
-0.1
+0.1
-0.1
+0.0
+0.5
stress
Tetracycline 0.012 mg/ml
+0.1
+0.0
-0.2
+0.3
+0.5
carbon source
D-Cellobiose (C)
-0.2
-0.1
+0.4
+0.5
+0.1
carbon source
NAG (C)
-0.0
-0.1
+0.6
-0.1
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
+0.0
+0.3
+0.3
+0.2
nitrogen source
Glucuronamide (N)
+0.0
-0.1
+0.0
+0.4
+0.4
stress
Zinc 2.5 mM
-0.0
-0.1
+0.3
+0.3
+0.3
stress
Paraquat dichloride 0.2 mg/ml
-0.0
+0.2
-0.1
+0.3
+0.3
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.1
+0.4
-0.3
+0.5
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
+0.1
+0.3
+0.2
+0.4
nitrogen source
Casamino Acids (N)
+0.1
+0.1
+0.6
-0.1
+0.2
carbon source
pyruvate (C)
+0.0
-0.0
+0.8
+0.2
+0.1
carbon source
D-Fructose (C)
-0.0
+0.2
+0.6
+0.3
+0.4
nitrogen source
L-Isoleucine (N)
+0.1
+0.0
+0.5
+0.6
+0.3
nitrogen source
L-Asparagine (N)
+0.2
+0.1
+0.1
+0.7
+1.0
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