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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS19345 and ABZR86_RS19350 overlap by 17 nucleotides
ABZR86_RS19350 and ABZR86_RS19355 are separated by 256 nucleotides
ABZR86_RS19355 and ABZR86_RS19360 are separated by 316 nucleotides
ABZR86_RS19360 and ABZR86_RS19365 are separated by 182 nucleotides
ABZR86_RS19345: ABZR86_RS19345 - formyl transferase, at 330,701 to 331,471
_RS19345
ABZR86_RS19350: ABZR86_RS19350 - polysaccharide deacetylase family protein, at 331,455 to 332,444
_RS19350
ABZR86_RS19355: ABZR86_RS19355 - DNA-binding transcriptional regulator OxyR, at 332,701 to 333,651
_RS19355
ABZR86_RS19360: ABZR86_RS19360 - M1 family metallopeptidase, at 333,968 to 336,655
_RS19360
ABZR86_RS19365: ABZR86_RS19365 - hypothetical protein, at 336,838 to 341,016
_RS19365
Group
Condition
ABZR86
_RS19345
ABZR86
_RS19350
ABZR86
_RS19355
ABZR86
_RS19360
ABZR86
_RS19365
stress
Tetracycline 0.024 mg/ml
+0.1
-0.1
-5.8
+0.1
+0.1
stress
D-Cycloserine 0.032 mg/ml
+0.1
-0.1
-4.5
+0.1
-0.1
stress
Tetracycline 0.012 mg/ml
-0.1
+0.0
-2.5
-0.0
+0.0
stress
Chloramphenicol 0.012 mg/ml
+0.1
-0.1
-1.7
+0.1
+0.0
stress
Cisplatin 0.0032 mg/ml
+0.1
+0.0
-1.2
-0.2
-0.0
stress
Ceftazidime 0.1 mg/ml
-0.3
-0.2
-0.6
+0.0
-0.2
lb
LB
-0.4
-0.2
-0.3
-0.2
-0.0
stress
Fusidic 0.2 mg/ml
-0.4
+0.0
-0.2
-0.1
-0.2
lb
LB
-0.1
-0.0
-0.5
-0.0
-0.2
stress
Chloramphenicol 0.008 mg/ml
-0.0
+0.0
-0.8
+0.0
-0.0
stress
Chlorite 0.32 mM
+0.0
+0.2
-1.0
+0.0
+0.0
stress
Dimethyl Sulfoxide 7.5 vol%
-0.3
+0.0
-0.4
+0.1
+0.1
stress
nitrate 150 mM
+0.1
+0.1
-0.7
-0.1
-0.0
stress
nitrate 200 mM
+0.2
+0.1
-0.6
-0.0
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.3
+0.1
-0.6
-0.1
-0.1
stress
Fusidic 0.4 mg/ml
+0.2
-0.2
-0.1
-0.2
+0.2
stress
Nalidixic 0.02 mg/ml
+0.4
-0.1
-0.3
-0.0
+0.1
carbon source
L-Proline (C)
-0.0
-0.2
+0.5
-0.1
-0.2
nitrogen source
Glucuronamide (N)
+0.1
-0.0
+0.5
-0.1
-0.2
nitrogen source
L-Asparagine (N)
-0.4
+0.2
+0.4
+0.3
-0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.1
+0.1
+0.4
-0.2
+0.1
carbon source
NAG (C)
+0.3
-0.1
+0.7
-0.1
-0.2
stress
perchlorate 75 mM
+0.7
-0.0
+0.3
-0.1
-0.1
stress
Nalidixic 0.08 mg/ml
+0.1
+0.1
+0.3
+0.1
+0.2
stress
Thallium(I) acetate 0.008 mg/ml
-0.5
+0.0
+2.5
-0.3
-0.4
stress
Thallium(I) acetate 0.016 mg/ml
-0.2
-0.1
+1.9
-0.1
-0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.8
+0.0
+1.0
-0.2
-0.0
carbon source
D-Galactose (C)
+0.7
-0.2
+1.0
-0.1
+0.4
carbon source
L-Alanine (C)
+0.5
-0.2
+1.8
-0.1
-0.3
carbon source
L-Alanine (C)
+0.5
-0.1
+1.8
-0.2
-0.0
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