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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS19255 and ABZR86_RS19260 are separated by 473 nucleotides
ABZR86_RS19260 and ABZR86_RS19265 are separated by 133 nucleotides
ABZR86_RS19265 and ABZR86_RS19270 are separated by 10 nucleotides
ABZR86_RS19270 and ABZR86_RS19275 are separated by 134 nucleotides
ABZR86_RS19255: ABZR86_RS19255 - DUF2127 domain-containing protein, at 308,090 to 308,599
_RS19255
ABZR86_RS19260: ABZR86_RS19260 - filamentous hemagglutinin N-terminal domain-containing protein, at 309,073 to 311,274
_RS19260
ABZR86_RS19265: ABZR86_RS19265 - YbdD/YjiX family protein, at 311,408 to 311,602
_RS19265
ABZR86_RS19270: ABZR86_RS19270 - carbon starvation CstA family protein, at 311,613 to 313,688
_RS19270
ABZR86_RS19275: ABZR86_RS19275 - hybrid sensor histidine kinase/response regulator, at 313,823 to 317,335
_RS19275
Group
Condition
ABZR86
_RS19255
ABZR86
_RS19260
ABZR86
_RS19265
ABZR86
_RS19270
ABZR86
_RS19275
carbon source
pyruvate (C)
+0.2
+0.2
-2.3
-2.2
+0.4
carbon source
pyruvate (C)
+0.2
+0.3
-2.1
-2.1
+0.6
stress
Sisomicin 0.016 mg/ml
-0.0
-0.0
-0.2
+0.0
-0.4
stress
Carbenicillin 0.02 mg/ml
-0.1
-0.2
-0.0
-0.2
-0.0
stress
Nalidixic 0.08 mg/ml
-0.1
-0.1
-0.3
+0.1
-0.1
stress
Carbenicillin 0.04 mg/ml
-0.2
-0.0
-0.2
-0.1
+0.0
carbon source
D-Fructose (C)
-0.0
-0.1
-0.2
-0.3
+0.2
stress
Zinc 2.5 mM
-0.3
-0.1
+0.1
-0.0
-0.0
stress
Paraquat dichloride 0.1 mg/ml
+0.2
-0.1
-0.1
-0.1
-0.1
carbon source
L-Alanine (C)
+0.2
-0.0
-0.2
-0.0
-0.1
stress
Paraquat dichloride 0.2 mg/ml
+0.3
+0.1
-0.1
-0.1
-0.1
carbon source
D-Galactose (C)
+0.2
+0.1
-0.1
-0.2
-0.1
stress
Fusidic 0.4 mg/ml
+0.2
-0.1
+0.0
+0.2
-0.2
carbon source
D-Cellobiose (C)
-0.1
+0.0
+0.1
-0.1
+0.2
stress
Chlorite 0.32 mM
+0.3
+0.1
-0.0
+0.0
-0.3
carbon source
L-Proline (C)
+0.3
+0.0
-0.2
+0.0
+0.1
stress
Chloride 250 mM
+0.1
-0.1
+0.2
-0.1
-0.0
carbon source
D-Maltose (C)
+0.2
+0.0
-0.0
-0.1
+0.2
stress
Cisplatin 0.0032 mg/ml
+0.3
-0.1
+0.2
-0.0
-0.1
carbon source
D-Maltose (C)
+0.1
+0.1
+0.1
+0.1
-0.1
stress
Tetracycline 0.024 mg/ml
+0.3
+0.1
+0.0
-0.0
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.4
-0.1
+0.1
+0.1
-0.2
stress
Ceftazidime 0.1 mg/ml
+0.3
+0.0
-0.1
+0.1
-0.0
carbon source
a-Cyclodextrin (C)
-0.2
-0.0
+0.3
+0.0
+0.3
carbon source
NAG (C)
+0.4
+0.2
-0.2
-0.1
+0.1
carbon source
D-Glucose (C)
+0.3
+0.0
+0.1
+0.1
-0.1
carbon source
NAG (C)
+0.3
+0.2
-0.0
-0.1
+0.1
carbon source
D-Cellobiose (C)
+0.3
+0.1
-0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.4
-0.0
+0.2
+0.1
+0.2
nitrogen source
L-Asparagine (N)
+0.6
+0.1
+0.2
+0.1
+0.1
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