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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS19140 and ABZR86_RS19145 are separated by 58 nucleotides
ABZR86_RS19145 and ABZR86_RS19150 are separated by 567 nucleotides
ABZR86_RS19150 and ABZR86_RS19155 are separated by 129 nucleotides
ABZR86_RS19155 and ABZR86_RS19160 overlap by 4 nucleotides
ABZR86_RS19140: ABZR86_RS19140 - outer membrane beta-barrel protein, at 272,020 to 272,745
_RS19140
ABZR86_RS19145: ABZR86_RS19145 - glucan ABC transporter ATP-binding protein/ permease, at 272,804 to 274,552
_RS19145
ABZR86_RS19150: ABZR86_RS19150 - TonB-dependent receptor, at 275,120 to 278,413
_RS19150
ABZR86_RS19155: ABZR86_RS19155 - heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein, at 278,543 to 279,607
_RS19155
ABZR86_RS19160: ABZR86_RS19160 - family 20 glycosylhydrolase, at 279,604 to 281,937
_RS19160
Group
Condition
ABZR86
_RS19140
ABZR86
_RS19145
ABZR86
_RS19150
ABZR86
_RS19155
ABZR86
_RS19160
lb
LB
-0.3
-0.6
-0.1
+0.1
-0.1
stress
Chloramphenicol 0.008 mg/ml
-0.4
-1.0
+0.2
+0.4
+0.1
stress
Carbenicillin 0.02 mg/ml
+0.0
-0.4
-0.1
-0.2
+0.1
nitrogen source
L-Asparagine (N)
-0.3
-0.1
+0.3
-0.3
-0.2
carbon source
D-Fructose (C)
+0.1
-0.7
-0.0
-0.1
+0.2
stress
Nalidixic 0.04 mg/ml
-0.2
-0.3
+0.0
+0.1
+0.0
stress
Chloride 250 mM
-0.3
-0.3
-0.0
+0.1
+0.2
stress
Tetracycline 0.024 mg/ml
-0.3
-0.2
+0.1
+0.1
-0.1
stress
sodium fluoride 40 mM
+0.1
-0.2
-0.2
+0.1
-0.1
carbon source
D-Maltose (C)
-0.1
-0.3
-0.1
+0.1
+0.1
stress
perchlorate 75 mM
-0.3
-0.1
-0.1
+0.1
+0.2
stress
Chloramphenicol 0.012 mg/ml
-0.1
+0.1
-0.1
-0.1
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
-0.1
-0.1
+0.3
-0.1
stress
Sisomicin 0.016 mg/ml
-0.2
+0.5
-0.2
+0.0
-0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.3
-0.1
-0.2
-0.1
nitrogen source
L-Isoleucine (N)
-0.2
+0.4
+0.0
-0.2
+0.0
carbon source
a-Cyclodextrin (C)
-0.3
+0.1
-0.0
+0.2
+0.1
stress
Nalidixic 0.08 mg/ml
-0.4
+0.4
+0.1
+0.1
+0.0
stress
A22 0.01 mg/ml
-0.3
+0.3
-0.0
-0.1
+0.2
stress
nitrite 6 mM
-0.2
+0.3
-0.0
+0.2
+0.0
stress
Thallium(I) acetate 0.016 mg/ml
-0.3
+0.3
+0.1
+0.1
+0.0
lb
LB
-0.1
+0.4
-0.1
+0.0
+0.2
carbon source
L-Proline (C)
-0.1
+0.3
+0.0
+0.2
-0.1
carbon source
NAG (C)
-0.1
+0.4
+0.0
+0.2
-0.0
stress
Ceftazidime 0.1 mg/ml
-0.1
+0.3
+0.0
+0.1
+0.1
carbon source
D-Glucose (C)
-0.0
+0.4
-0.0
+0.1
-0.0
nitrogen source
Casamino Acids (N)
+0.0
+0.6
-0.0
-0.0
-0.0
nitrogen source
L-Proline (N)
+0.3
-0.1
+0.1
+0.2
+0.0
stress
Fusidic 0.2 mg/ml
+0.2
+0.4
-0.2
+0.3
+0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.1
+0.4
+0.2
+0.3
+0.1
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