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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS19115 and ABZR86_RS19120 are separated by 403 nucleotides
ABZR86_RS19120 and ABZR86_RS19125 are separated by 32 nucleotides
ABZR86_RS19125 and ABZR86_RS19130 are separated by 183 nucleotides
ABZR86_RS19130 and ABZR86_RS19135 are separated by 101 nucleotides
ABZR86_RS19115: ABZR86_RS19115 - LPS export ABC transporter permease LptG, at 267,122 to 268,225
_RS19115
ABZR86_RS19120: ABZR86_RS19120 - response regulator, at 268,629 to 269,324
_RS19120
ABZR86_RS19125: ABZR86_RS19125 - ATP-binding protein, at 269,357 to 270,634
_RS19125
ABZR86_RS19130: ABZR86_RS19130 - outer membrane beta-barrel protein, at 270,818 to 271,510
_RS19130
ABZR86_RS19135: ABZR86_RS19135 - hypothetical protein, at 271,612 to 271,872
_RS19135
Group
Condition
ABZR86
_RS19115
ABZR86
_RS19120
ABZR86
_RS19125
ABZR86
_RS19130
ABZR86
_RS19135
carbon source
D-Maltose (C)
N.D.
-0.2
-0.0
-0.0
-1.8
nitrogen source
Glucuronamide (N)
N.D.
+0.2
+0.1
+0.1
-1.6
nitrogen source
Casamino Acids (N)
N.D.
-0.4
+0.1
+0.1
-0.9
stress
Spectinomycin 0.04 mg/ml
N.D.
-0.2
-0.1
-0.0
-0.7
nitrogen source
nitrate (N)
N.D.
-0.1
+0.1
+0.0
-1.0
stress
Nalidixic 0.08 mg/ml
N.D.
+0.4
-0.0
+0.1
-1.4
stress
Paraquat dichloride 0.2 mg/ml
N.D.
-0.5
-0.1
-0.0
-0.2
stress
Paraquat dichloride 0.05 mg/ml
N.D.
-0.2
+0.0
-0.1
-0.5
carbon source
pyruvate (C)
N.D.
+0.1
+0.1
+0.2
-1.1
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-0.4
+0.1
+0.1
-0.1
lb
LB
N.D.
-0.9
-0.1
-0.3
+1.2
stress
Sisomicin 0.016 mg/ml
N.D.
-0.2
-0.0
-0.2
+0.5
stress
Cisplatin 0.0032 mg/ml
N.D.
-0.1
-0.2
-0.0
+0.5
stress
Tetracycline 0.012 mg/ml
N.D.
-0.3
+0.0
+0.1
+0.7
stress
Nalidixic 0.04 mg/ml
N.D.
+0.2
-0.1
-0.2
+0.7
carbon source
D-Fructose (C)
N.D.
+0.4
-0.2
+0.0
+0.4
carbon source
D-Maltose (C)
N.D.
+0.3
+0.0
-0.1
+0.5
carbon source
pyruvate (C)
N.D.
-0.2
+0.0
+0.1
+0.8
carbon source
L-Alanine (C)
N.D.
+0.3
-0.1
+0.0
+0.5
nitrogen source
L-Leucine (N)
N.D.
-0.0
-0.2
+0.1
+0.8
stress
sodium fluoride 60 mM
N.D.
+0.1
+0.1
-0.1
+0.7
nitrogen source
L-Arginine (N)
N.D.
+0.1
-0.1
+0.1
+0.7
stress
nitrate 200 mM
N.D.
+0.0
+0.0
-0.0
+0.9
carbon source
D-Glucose (C)
N.D.
+0.1
+0.2
+0.2
+0.4
carbon source
NAG (C)
N.D.
+0.1
+0.1
+0.0
+0.7
stress
A22 0.01 mg/ml
N.D.
+0.2
+0.0
+0.2
+0.6
stress
Tetracycline 0.024 mg/ml
N.D.
-0.0
+0.0
+0.1
+1.2
lb
LB
N.D.
+0.3
+0.1
+0.0
+1.0
nitrogen source
L-Lysine (N)
N.D.
+0.4
+0.1
+0.2
+0.8
stress
Chloramphenicol 0.008 mg/ml
N.D.
+0.3
+0.1
-0.0
+1.2
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