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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS18640 and ABZR86_RS18645 are separated by 136 nucleotides
ABZR86_RS18645 and ABZR86_RS18650 are separated by 249 nucleotides
ABZR86_RS18650 and ABZR86_RS18655 are separated by 255 nucleotides
ABZR86_RS18655 and ABZR86_RS18660 are separated by 198 nucleotides
ABZR86_RS18640: ABZR86_RS18640 - class I fructose-bisphosphate aldolase, at 152,344 to 153,348
_RS18640
ABZR86_RS18645: ABZR86_RS18645 - porin family protein, at 153,485 to 154,075
_RS18645
ABZR86_RS18650: ABZR86_RS18650 - hypothetical protein, at 154,325 to 155,074
_RS18650
ABZR86_RS18655: ABZR86_RS18655 - transketolase, at 155,330 to 157,339
_RS18655
ABZR86_RS18660: ABZR86_RS18660 - alpha/beta hydrolase, at 157,538 to 158,554
_RS18660
Group
Condition
ABZR86
_RS18640
ABZR86
_RS18645
ABZR86
_RS18650
ABZR86
_RS18655
ABZR86
_RS18660
carbon source
D-Galactose (C)
-5.1
+0.2
-0.0
-3.9
-0.0
carbon source
L-Proline (C)
-4.6
+0.1
+0.0
-3.4
-0.0
carbon source
L-Proline (C)
-3.8
-0.1
-0.0
-3.4
-0.1
carbon source
pyruvate (C)
-4.4
+0.0
+0.0
-3.0
-0.0
carbon source
pyruvate (C)
-4.0
+0.0
+0.0
-3.2
+0.1
carbon source
L-Alanine (C)
-3.8
-0.1
-0.1
-2.2
-0.1
carbon source
L-Alanine (C)
-4.0
+0.1
-0.0
-2.5
+0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
-1.8
+0.1
+0.0
-4.6
+0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
-1.5
+0.0
-0.0
-4.8
+0.0
stress
Sisomicin 0.016 mg/ml
-3.1
+0.0
-0.1
-2.4
+0.0
carbon source
D-Maltose (C)
-1.8
+0.2
-0.0
-3.7
-0.0
carbon source
D-Maltose (C)
-2.0
+0.0
+0.1
-3.5
+0.1
carbon source
D-Glucose (C)
-2.1
+0.0
-0.0
-2.8
-0.1
carbon source
a-Cyclodextrin (C)
-1.3
+0.1
-0.1
-3.6
-0.1
nitrogen source
L-Isoleucine (N)
-0.6
+0.1
-0.1
-4.6
+0.2
carbon source
D-Cellobiose (C)
-1.6
-0.0
-0.0
-3.2
-0.1
carbon source
a-Cyclodextrin (C)
-1.7
+0.3
-0.1
-3.4
-0.0
carbon source
NAG (C)
-1.1
+0.1
+0.1
-3.8
-0.1
carbon source
D-Cellobiose (C)
-1.6
+0.1
-0.1
-3.3
+0.1
carbon source
NAG (C)
-0.7
+0.2
+0.1
-4.4
+0.0
carbon source
D-Glucose (C)
-2.3
+0.1
+0.0
-2.6
+0.1
nitrogen source
Casamino Acids (N)
-0.4
+0.1
+0.1
-4.1
-0.0
nitrogen source
L-Lysine (N)
-0.4
-0.1
+0.0
-3.3
+0.2
nitrogen source
L-Arginine (N)
-0.6
+0.1
+0.1
-3.2
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
+0.6
+0.0
-0.1
-3.3
-0.0
stress
Spectinomycin 0.04 mg/ml
-0.4
-0.8
-0.4
+3.0
-0.0
stress
Nalidixic 0.02 mg/ml
+2.0
-0.5
-0.0
+1.3
+0.1
stress
Nalidixic 0.08 mg/ml
+2.5
-0.0
+0.0
+2.1
+0.0
stress
Nalidixic 0.04 mg/ml
+3.7
-0.2
+0.1
+2.7
+0.2
stress
Fusidic 0.4 mg/ml
+4.4
-0.4
-0.8
+4.2
+0.1
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