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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS17830 and ABZR86_RS17835 are separated by 84 nucleotides
ABZR86_RS17835 and ABZR86_RS17840 are separated by 172 nucleotides
ABZR86_RS17840 and ABZR86_RS17845 are separated by 170 nucleotides
ABZR86_RS17845 and ABZR86_RS17850 are separated by 191 nucleotides
ABZR86_RS17830: ABZR86_RS17830 - flagellar motor stator protein MotA, at 4,022,617 to 4,023,486
_RS17830
ABZR86_RS17835: ABZR86_RS17835 - hypothetical protein, at 4,023,571 to 4,024,065
_RS17835
ABZR86_RS17840: ABZR86_RS17840 - hypothetical protein, at 4,024,238 to 4,024,534
_RS17840
ABZR86_RS17845: ABZR86_RS17845 - N-acetylmuramidase domain-containing protein, at 4,024,705 to 4,025,958
_RS17845
ABZR86_RS17850: ABZR86_RS17850 - YceI family protein, at 4,026,150 to 4,026,779
_RS17850
Group
Condition
ABZR86
_RS17830
ABZR86
_RS17835
ABZR86
_RS17840
ABZR86
_RS17845
ABZR86
_RS17850
stress
Nalidixic 0.08 mg/ml
-0.3
-0.1
-0.2
-0.0
-0.2
stress
sodium fluoride 40 mM
-0.2
-0.2
-0.1
-0.1
-0.2
carbon source
L-Alanine (C)
+0.2
-0.7
-0.2
+0.2
+0.0
stress
nitrate 150 mM
+0.1
+0.0
-0.3
-0.1
-0.2
stress
Nalidixic 0.04 mg/ml
+0.0
+0.1
-0.4
-0.2
-0.0
carbon source
D-Glucose (C)
-0.0
+0.1
-0.5
-0.1
+0.1
stress
Fusidic 0.4 mg/ml
+0.1
-0.3
+0.1
-0.1
-0.2
carbon source
NAG (C)
+0.1
-0.1
-0.6
+0.1
+0.3
stress
Fusidic 0.2 mg/ml
+0.2
+0.0
-0.3
+0.0
-0.2
carbon source
D-Fructose (C)
+0.0
-0.4
-0.3
+0.2
+0.3
carbon source
D-Galactose (C)
+0.1
-0.5
+0.0
+0.1
+0.1
stress
Chlorite 0.32 mM
+0.0
+0.3
-0.4
+0.0
-0.1
carbon source
a-Cyclodextrin (C)
-0.1
+0.0
-0.3
+0.0
+0.4
carbon source
D-Maltose (C)
+0.1
-0.3
+0.1
-0.1
+0.2
carbon source
L-Alanine (C)
+0.1
-0.6
+0.1
+0.1
+0.4
nitrogen source
L-Lysine (N)
+0.2
-0.1
-0.3
+0.0
+0.2
nitrogen source
L-Proline (N)
+0.0
+0.5
-0.2
+0.0
-0.2
lb
LB
+0.3
-0.2
+0.0
-0.0
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.1
+0.2
+0.3
-0.1
-0.1
lb
LB
+0.3
+0.2
-0.1
-0.1
-0.0
stress
Ceftazidime 0.05 mg/ml
+0.0
+0.1
+0.3
+0.2
-0.3
carbon source
D-Glucose (C)
+0.0
+0.2
-0.2
+0.2
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
-0.2
+0.6
+0.0
-0.0
nitrogen source
L-Asparagine (N)
+0.1
+0.2
+1.0
-0.3
-0.5
stress
Tetracycline 0.024 mg/ml
-0.0
+0.5
+0.3
-0.1
-0.0
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.1
+0.4
-0.0
+0.1
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.2
+0.1
+0.1
+0.1
carbon source
pyruvate (C)
+0.2
+0.2
+0.2
+0.2
-0.0
stress
Thallium(I) acetate 0.016 mg/ml
+0.2
+0.4
+0.2
-0.0
+0.2
carbon source
D-Cellobiose (C)
+0.3
+0.0
+0.3
+0.1
+0.3
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