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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS17695 and ABZR86_RS17700 are separated by 71 nucleotides
ABZR86_RS17700 and ABZR86_RS17705 are separated by 23 nucleotides
ABZR86_RS17705 and ABZR86_RS17710 are separated by 1 nucleotides
ABZR86_RS17710 and ABZR86_RS17715 are separated by 134 nucleotides
ABZR86_RS17695: ABZR86_RS17695 - MerR family DNA-binding protein, at 3,992,794 to 3,993,222
_RS17695
ABZR86_RS17700: ABZR86_RS17700 - oxidoreductase, at 3,993,294 to 3,994,127
_RS17700
ABZR86_RS17705: ABZR86_RS17705 - ATP-binding protein, at 3,994,151 to 3,995,203
_RS17705
ABZR86_RS17710: ABZR86_RS17710 - response regulator transcription factor, at 3,995,205 to 3,995,900
_RS17710
ABZR86_RS17715: ABZR86_RS17715 - efflux transporter outer membrane subunit, at 3,996,035 to 3,997,492
_RS17715
Group
Condition
ABZR86
_RS17695
ABZR86
_RS17700
ABZR86
_RS17705
ABZR86
_RS17710
ABZR86
_RS17715
stress
Nalidixic 0.08 mg/ml
-0.8
+0.1
-0.1
-0.1
-0.0
stress
Fusidic 0.2 mg/ml
-0.3
+0.1
-0.5
+0.1
-0.0
stress
Chloramphenicol 0.008 mg/ml
-0.5
+0.2
+0.3
-0.1
+0.1
nitrogen source
L-Isoleucine (N)
-0.3
+0.2
+0.2
-0.2
+0.3
stress
Sisomicin 0.016 mg/ml
-0.2
+0.5
+0.2
+0.0
-0.2
stress
Zinc 2.5 mM
+0.6
-0.1
-0.3
+0.0
+0.2
carbon source
pyruvate (C)
-0.3
+0.3
+0.3
+0.1
+0.1
stress
Fusidic 0.4 mg/ml
-0.4
+0.3
+0.3
+0.1
+0.2
stress
Cisplatin 0.0032 mg/ml
-0.1
+0.3
+0.2
-0.1
+0.3
nitrogen source
L-Arginine (N)
+0.2
+0.0
-0.3
+0.4
+0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.0
+0.4
-0.4
+0.1
+0.4
nitrogen source
L-Asparagine (N)
+0.0
+0.7
+0.1
+0.2
-0.4
stress
perchlorate 75 mM
+0.5
+0.8
-0.2
-0.0
-0.1
carbon source
D-Cellobiose (C)
+0.4
+0.3
-0.0
+0.2
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
+0.2
+0.3
+0.2
+0.0
+0.2
carbon source
D-Maltose (C)
+0.3
+0.2
+0.2
+0.2
+0.1
stress
D-Cycloserine 0.032 mg/ml
+0.5
+0.5
+0.1
+0.0
+0.0
carbon source
NAG (C)
+0.6
+0.3
-0.1
+0.2
+0.2
carbon source
D-Glucose (C)
+0.7
-0.1
+0.2
+0.0
+0.3
stress
A22 0.02 mg/ml
+0.3
+0.3
+0.2
+0.1
+0.2
carbon source
a-Cyclodextrin (C)
+0.7
+0.2
+0.1
+0.0
+0.2
nitrogen source
L-Leucine (N)
+0.5
+0.1
+0.6
-0.1
+0.1
lb
LB
+0.6
+0.2
+0.3
+0.3
+0.0
stress
Ceftazidime 0.1 mg/ml
+0.1
+0.6
+0.3
+0.1
+0.4
lb
LB
+0.2
+0.6
+0.5
+0.1
+0.1
carbon source
L-Proline (C)
+0.8
+0.3
+0.1
+0.1
+0.2
carbon source
L-Proline (C)
+0.6
+0.1
+0.6
+0.0
+0.2
nitrogen source
L-Proline (N)
+0.5
+0.6
+0.2
-0.0
+0.3
carbon source
D-Fructose (C)
+0.7
+0.1
+0.5
+0.1
+0.3
lb
LB
+0.6
+0.2
+0.3
+0.4
+0.5
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ABZR86_RS17705
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