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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS17625 and ABZR86_RS17630 overlap by 4 nucleotides
ABZR86_RS17630 and ABZR86_RS17635 are separated by 372 nucleotides
ABZR86_RS17635 and ABZR86_RS17640 are separated by 145 nucleotides
ABZR86_RS17640 and ABZR86_RS17645 are separated by 81 nucleotides
ABZR86_RS17625: ABZR86_RS17625 - RHS repeat-associated core domain-containing protein, at 3,978,004 to 3,981,276
_RS17625
ABZR86_RS17630: ABZR86_RS17630 - DUF6531 domain-containing protein, at 3,981,273 to 3,983,645
_RS17630
ABZR86_RS17635: ABZR86_RS17635 - hypothetical protein, at 3,984,018 to 3,984,947
_RS17635
ABZR86_RS17640: ABZR86_RS17640 - hypothetical protein, at 3,985,093 to 3,986,178
_RS17640
ABZR86_RS17645: ABZR86_RS17645 - hypothetical protein, at 3,986,260 to 3,986,757
_RS17645
Group
Condition
ABZR86
_RS17625
ABZR86
_RS17630
ABZR86
_RS17635
ABZR86
_RS17640
ABZR86
_RS17645
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+0.0
-0.1
-0.2
-0.2
stress
Chloride 250 mM
+0.0
+0.0
-0.1
-0.2
-0.1
stress
Chloramphenicol 0.008 mg/ml
+0.1
+0.1
-0.0
-0.2
-0.1
stress
Zinc 2.5 mM
+0.0
+0.0
-0.0
+0.1
-0.3
carbon source
D-Fructose (C)
+0.2
+0.1
+0.1
-0.1
-0.3
stress
Nalidixic 0.08 mg/ml
+0.1
-0.0
-0.1
-0.1
+0.1
stress
Sisomicin 0.016 mg/ml
+0.1
+0.1
-0.1
+0.1
-0.2
carbon source
NAG (C)
+0.1
+0.1
+0.1
-0.1
-0.1
nitrogen source
L-Isoleucine (N)
+0.1
+0.0
-0.1
-0.1
+0.2
stress
Chloramphenicol 0.012 mg/ml
+0.0
+0.2
-0.1
+0.2
-0.1
carbon source
D-Galactose (C)
-0.1
-0.1
+0.1
-0.1
+0.3
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.0
-0.0
+0.2
+0.1
lb
LB
+0.0
+0.3
+0.1
+0.2
-0.3
stress
Tetracycline 0.012 mg/ml
+0.0
+0.1
-0.0
+0.1
+0.2
carbon source
pyruvate (C)
-0.0
+0.1
-0.0
+0.1
+0.2
carbon source
D-Maltose (C)
+0.1
+0.1
+0.1
-0.0
+0.2
stress
nitrite 6 mM
+0.1
+0.1
+0.1
+0.1
+0.1
nitrogen source
L-Asparagine (N)
+0.2
+0.2
+0.3
-0.2
+0.1
nitrogen source
L-Arginine (N)
+0.0
+0.1
+0.1
+0.2
+0.2
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.1
+0.1
+0.2
+0.1
lb
LB
+0.1
+0.1
+0.1
-0.1
+0.3
stress
D-Cycloserine 0.032 mg/ml
+0.1
+0.0
+0.0
+0.1
+0.4
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.1
+0.1
+0.0
+0.1
+0.2
nitrogen source
nitrate (N)
+0.0
+0.1
+0.0
-0.0
+0.4
lb
LB
+0.1
+0.1
+0.2
+0.2
+0.1
nitrogen source
Casamino Acids (N)
+0.1
+0.1
+0.0
+0.1
+0.4
nitrogen source
Glucuronamide (N)
+0.0
+0.1
+0.1
+0.3
+0.2
nitrogen source
L-Lysine (N)
+0.1
+0.2
+0.1
+0.2
+0.1
lb
LB
+0.1
+0.2
+0.2
+0.2
+0.3
stress
Ceftazidime 0.1 mg/ml
+0.3
+0.3
+0.4
+0.2
+0.3
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