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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS17505 and ABZR86_RS17510 are separated by 10 nucleotides
ABZR86_RS17510 and ABZR86_RS17515 are separated by 214 nucleotides
ABZR86_RS17515 and ABZR86_RS17520 are separated by 109 nucleotides
ABZR86_RS17520 and ABZR86_RS17525 are separated by 220 nucleotides
ABZR86_RS17505: ABZR86_RS17505 - lipoyl synthase, at 3,952,419 to 3,953,414
_RS17505
ABZR86_RS17510: ABZR86_RS17510 - carboxy terminal-processing peptidase, at 3,953,425 to 3,955,677
_RS17510
ABZR86_RS17515: ABZR86_RS17515 - DUF4126 domain-containing protein, at 3,955,892 to 3,956,500
_RS17515
ABZR86_RS17520: ABZR86_RS17520 - M1 family metallopeptidase, at 3,956,610 to 3,958,367
_RS17520
ABZR86_RS17525: ABZR86_RS17525 - DUF559 domain-containing protein, at 3,958,588 to 3,958,983
_RS17525
Group
Condition
ABZR86
_RS17505
ABZR86
_RS17510
ABZR86
_RS17515
ABZR86
_RS17520
ABZR86
_RS17525
stress
Fusidic 0.2 mg/ml
N.D.
-6.0
-0.0
+0.1
+0.2
stress
Fusidic 0.4 mg/ml
N.D.
-4.5
+0.0
+0.1
+0.3
stress
Tetracycline 0.024 mg/ml
N.D.
-2.9
-0.0
+0.1
-0.0
carbon source
D-Galactose (C)
N.D.
-1.8
-0.2
-0.0
-0.2
stress
Chlorite 0.32 mM
N.D.
-1.5
+0.0
-0.0
-0.1
stress
Zinc 2.5 mM
N.D.
-1.9
-0.0
+0.0
+0.3
stress
Tetracycline 0.012 mg/ml
N.D.
-1.4
-0.1
+0.1
-0.2
stress
Spectinomycin 0.04 mg/ml
N.D.
-1.6
+0.2
+0.3
-0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
-1.1
+0.0
-0.1
-0.2
stress
Nalidixic 0.04 mg/ml
N.D.
-1.0
-0.0
+0.0
-0.2
stress
Carbenicillin 0.04 mg/ml
N.D.
-1.1
+0.0
+0.0
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
-1.0
+0.0
-0.0
-0.0
stress
Nalidixic 0.08 mg/ml
N.D.
-1.1
-0.0
+0.0
+0.1
lb
LB
N.D.
-0.2
-0.4
+0.3
-0.7
carbon source
NAG (C)
N.D.
-0.7
-0.0
-0.0
-0.3
carbon source
L-Alanine (C)
N.D.
-0.3
-0.1
-0.0
-0.5
carbon source
NAG (C)
N.D.
-0.5
-0.1
+0.0
-0.2
stress
Sisomicin 0.016 mg/ml
N.D.
-1.4
+0.1
+0.3
+0.3
stress
nitrate 200 mM
N.D.
-0.8
+0.1
-0.0
-0.0
stress
Chloride 250 mM
N.D.
-0.6
+0.1
-0.0
-0.2
stress
Chloramphenicol 0.012 mg/ml
N.D.
-0.5
+0.0
+0.1
-0.2
stress
Carbenicillin 0.02 mg/ml
N.D.
-0.7
-0.0
+0.0
+0.2
lb
LB
N.D.
-0.4
-0.1
+0.2
-0.2
stress
Nalidixic 0.01 mg/ml
N.D.
-0.7
+0.1
+0.0
+0.1
nitrogen source
L-Asparagine (N)
N.D.
-0.6
+0.2
+0.2
+0.1
stress
Paraquat dichloride 0.1 mg/ml
N.D.
-0.4
+0.2
+0.0
+0.2
stress
Ceftazidime 0.1 mg/ml
N.D.
-0.8
+0.4
+0.3
+0.2
nitrogen source
Casamino Acids (N)
N.D.
-0.3
+0.1
+0.1
+0.4
carbon source
D-Fructose (C)
N.D.
-0.1
-0.2
+0.1
+0.5
stress
Chloramphenicol 0.008 mg/ml
N.D.
-0.2
+0.3
+0.0
+0.3
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