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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS16705 and ABZR86_RS16710 are separated by 3 nucleotides
ABZR86_RS16710 and ABZR86_RS16715 overlap by 1 nucleotides
ABZR86_RS16715 and ABZR86_RS16720 are separated by 2 nucleotides
ABZR86_RS16720 and ABZR86_RS16725 are separated by 66 nucleotides
ABZR86_RS16705: ABZR86_RS16705 - hypothetical protein, at 3,772,357 to 3,773,058
_RS16705
ABZR86_RS16710: ABZR86_RS16710 - hypothetical protein, at 3,773,062 to 3,773,364
_RS16710
ABZR86_RS16715: ABZR86_RS16715 - host specificity protein J, at 3,773,364 to 3,776,531
_RS16715
ABZR86_RS16720: ABZR86_RS16720 - tail assembly protein, at 3,776,534 to 3,777,199
_RS16720
ABZR86_RS16725: ABZR86_RS16725 - C40 family peptidase, at 3,777,266 to 3,778,003
_RS16725
Group
Condition
ABZR86
_RS16705
ABZR86
_RS16710
ABZR86
_RS16715
ABZR86
_RS16720
ABZR86
_RS16725
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.1
-0.2
-0.1
-0.5
stress
Fusidic 0.2 mg/ml
-0.1
+0.0
-0.1
-0.2
-0.2
stress
Zinc 2.5 mM
+0.0
-0.2
+0.0
-0.2
-0.1
stress
Chloride 250 mM
-0.1
-0.2
+0.0
+0.1
-0.3
stress
Sisomicin 0.016 mg/ml
+0.1
-0.0
+0.0
+0.2
-0.7
stress
Chloramphenicol 0.008 mg/ml
-0.1
-0.6
-0.1
+0.2
+0.2
stress
Paraquat dichloride 0.1 mg/ml
-0.1
+0.2
-0.0
-0.0
-0.3
stress
Nalidixic 0.02 mg/ml
-0.1
-0.1
+0.1
-0.1
+0.2
stress
Thallium(I) acetate 0.008 mg/ml
+0.2
+0.2
-0.0
-0.0
-0.4
lb
LB
-0.3
+0.1
-0.2
+0.6
+0.0
nitrogen source
L-Isoleucine (N)
+0.0
-0.1
-0.1
+0.2
+0.3
carbon source
L-Alanine (C)
-0.1
-0.2
-0.0
+0.2
+0.4
carbon source
pyruvate (C)
+0.1
+0.3
+0.0
-0.0
-0.1
lb
LB
+0.0
+0.3
-0.1
+0.2
-0.1
nitrogen source
L-Asparagine (N)
-0.0
+0.5
-0.1
+0.4
-0.4
carbon source
D-Galactose (C)
+0.1
-0.2
-0.0
+0.2
+0.4
carbon source
D-Glucose (C)
-0.1
-0.1
+0.1
+0.1
+0.5
carbon source
pyruvate (C)
-0.0
-0.1
-0.0
+0.0
+0.6
carbon source
L-Alanine (C)
-0.2
-0.1
+0.0
+0.2
+0.6
carbon source
L-Proline (C)
+0.0
+0.1
-0.0
+0.2
+0.3
carbon source
D-Fructose (C)
+0.1
-0.0
+0.1
+0.1
+0.4
nitrogen source
nitrate (N)
+0.1
+0.3
-0.0
+0.1
+0.3
carbon source
D-Fructose (C)
+0.2
+0.3
+0.1
-0.0
+0.1
carbon source
NAG (C)
+0.2
+0.2
+0.0
-0.0
+0.4
nitrogen source
L-Arginine (N)
+0.1
+0.2
+0.1
+0.1
+0.3
stress
Ceftazidime 0.1 mg/ml
+0.1
+0.3
+0.0
+0.0
+0.4
stress
A22 0.02 mg/ml
+0.2
+0.3
+0.0
+0.2
+0.2
carbon source
a-Cyclodextrin (C)
+0.1
+0.1
+0.0
+0.2
+0.4
stress
Chlorite 0.32 mM
+0.1
+0.1
+0.0
+0.4
+0.2
carbon source
D-Maltose (C)
+0.2
+0.1
+0.2
+0.2
+0.3
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