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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS16595 and ABZR86_RS16600 are separated by 296 nucleotides
ABZR86_RS16600 and ABZR86_RS16605 are separated by 36 nucleotides
ABZR86_RS16605 and ABZR86_RS16610 are separated by 10 nucleotides
ABZR86_RS16610 and ABZR86_RS16615 are separated by 153 nucleotides
ABZR86_RS16595: ABZR86_RS16595 - tetratricopeptide repeat protein, at 3,745,277 to 3,745,705
_RS16595
ABZR86_RS16600: ABZR86_RS16600 - hypothetical protein, at 3,746,002 to 3,751,902
_RS16600
ABZR86_RS16605: ABZR86_RS16605 - RHS repeat-associated core domain-containing protein, at 3,751,939 to 3,752,868
_RS16605
ABZR86_RS16610: ABZR86_RS16610 - hypothetical protein, at 3,752,879 to 3,753,394
_RS16610
ABZR86_RS16615: ABZR86_RS16615 - ankyrin repeat domain-containing protein, at 3,753,548 to 3,754,192
_RS16615
Group
Condition
ABZR86
_RS16595
ABZR86
_RS16600
ABZR86
_RS16605
ABZR86
_RS16610
ABZR86
_RS16615
carbon source
NAG (C)
-0.4
-0.1
-0.1
-3.9
-0.0
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.2
+0.0
+0.1
-3.6
-0.3
carbon source
D-Galactose (C)
+0.1
+0.1
+0.1
-4.1
-0.1
carbon source
NAG (C)
-0.0
+0.1
+0.2
-3.8
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.4
+0.0
+0.0
-3.0
+0.0
carbon source
L-Proline (C)
-0.5
-0.1
+0.2
-1.2
-0.2
carbon source
L-Alanine (C)
-0.5
-0.1
-0.1
-0.3
-0.5
carbon source
L-Proline (C)
-0.1
-0.0
-0.0
-0.7
-0.2
stress
perchlorate 75 mM
+0.2
-0.0
-0.3
-0.3
-0.0
stress
Fusidic 0.4 mg/ml
+0.3
-0.1
-0.0
-0.1
-0.6
stress
Fusidic 0.2 mg/ml
+0.2
-0.1
-0.3
-0.8
+0.7
stress
nitrite 6 mM
+0.3
-0.0
+0.0
-0.3
-0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.2
-0.0
-0.1
+0.8
-0.8
stress
Nalidixic 0.01 mg/ml
+0.3
-0.0
+0.0
-0.3
-0.3
carbon source
D-Cellobiose (C)
-0.4
-0.0
+0.1
+0.7
-0.3
stress
Zinc 2.5 mM
-0.3
-0.1
-0.1
+1.1
-0.5
stress
Nalidixic 0.02 mg/ml
+0.2
+0.0
-0.0
-0.4
+0.4
carbon source
a-Cyclodextrin (C)
-0.3
+0.1
+0.1
+0.4
+0.1
carbon source
D-Glucose (C)
-0.0
+0.1
+0.2
+0.4
-0.2
stress
Spectinomycin 0.04 mg/ml
+0.6
+0.0
-0.1
+0.7
-0.5
nitrogen source
L-Asparagine (N)
+0.3
+0.0
+0.1
-0.2
+0.6
stress
Chloramphenicol 0.008 mg/ml
-0.1
+0.0
+0.1
+0.6
+0.2
stress
Thallium(I) acetate 0.016 mg/ml
+0.1
+0.1
+0.0
+0.6
-0.0
nitrogen source
L-Leucine (N)
-0.1
-0.1
-0.0
+0.7
+0.4
nitrogen source
Casamino Acids (N)
+0.2
-0.0
+0.1
+0.2
+0.5
nitrogen source
L-Arginine (N)
+0.3
+0.0
+0.0
+0.8
-0.0
nitrogen source
L-Isoleucine (N)
-0.2
-0.0
-0.1
+1.6
-0.2
nitrogen source
Glucuronamide (N)
-0.1
+0.0
-0.0
+0.9
+0.4
carbon source
D-Fructose (C)
-0.1
+0.0
+0.1
+0.9
+0.3
carbon source
D-Cellobiose (C)
+0.1
+0.1
+0.3
+0.9
+0.1
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