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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS16405 and ABZR86_RS16410 overlap by 4 nucleotides
ABZR86_RS16410 and ABZR86_RS16415 are separated by 90 nucleotides
ABZR86_RS16415 and ABZR86_RS16420 are separated by 303 nucleotides
ABZR86_RS16420 and ABZR86_RS16425 are separated by 4 nucleotides
ABZR86_RS16405: ABZR86_RS16405 - ABC transporter permease, at 3,705,934 to 3,706,710
_RS16405
ABZR86_RS16410: ABZR86_RS16410 - ABC transporter ATP-binding protein, at 3,706,707 to 3,707,675
_RS16410
ABZR86_RS16415: ABZR86_RS16415 - FAD-binding oxidoreductase, at 3,707,766 to 3,708,512
_RS16415
ABZR86_RS16420: ABZR86_RS16420 - type 1 fimbrial protein, at 3,708,816 to 3,709,160
_RS16420
ABZR86_RS16425: ABZR86_RS16425 - fimbrial protein, at 3,709,165 to 3,710,106
_RS16425
Group
Condition
ABZR86
_RS16405
ABZR86
_RS16410
ABZR86
_RS16415
ABZR86
_RS16420
ABZR86
_RS16425
stress
Paraquat dichloride 0.1 mg/ml
-1.9
-2.0
-1.0
+0.0
-0.2
stress
Thallium(I) acetate 0.008 mg/ml
-1.1
-1.6
-1.6
-0.1
+0.1
stress
Paraquat dichloride 0.05 mg/ml
-1.6
-1.1
-1.0
+0.0
-0.0
stress
Thallium(I) acetate 0.016 mg/ml
-1.0
-1.1
-0.5
-0.0
+0.0
stress
Paraquat dichloride 0.2 mg/ml
-0.6
-0.9
-0.5
-0.0
+0.1
stress
Sisomicin 0.016 mg/ml
-1.2
-0.8
+0.2
-0.2
+0.1
nitrogen source
L-Leucine (N)
-0.9
-0.5
+0.1
-0.2
+0.1
lb
LB
-0.0
-0.6
+0.0
-0.2
-0.2
carbon source
D-Galactose (C)
-0.4
-0.4
-0.0
-0.0
-0.0
stress
sodium fluoride 40 mM
-0.2
-0.2
-0.3
-0.1
-0.1
stress
Spectinomycin 0.04 mg/ml
-0.2
-0.1
+0.2
-0.4
-0.2
stress
Zinc 2.5 mM
-0.5
-0.4
+0.5
-0.2
-0.1
nitrogen source
Casamino Acids (N)
-0.1
+0.0
-0.3
-0.4
+0.1
stress
nitrite 6 mM
-0.3
-0.3
-0.2
+0.0
+0.1
carbon source
NAG (C)
-0.3
-0.4
-0.0
-0.0
+0.1
carbon source
NAG (C)
-0.4
-0.4
+0.1
-0.0
+0.1
carbon source
pyruvate (C)
-0.1
-0.4
-0.2
+0.1
+0.0
stress
A22 0.02 mg/ml
-0.3
-0.2
-0.1
+0.1
+0.0
stress
Cisplatin 0.0032 mg/ml
-0.2
-0.3
+0.2
-0.1
-0.0
carbon source
L-Alanine (C)
-0.4
-0.1
+0.4
-0.1
-0.1
stress
Fusidic 0.4 mg/ml
+0.3
+0.1
-0.5
+0.0
-0.2
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.2
-0.3
-0.2
+0.1
carbon source
L-Alanine (C)
-0.2
-0.2
+0.3
+0.1
-0.1
stress
Chloramphenicol 0.008 mg/ml
+0.0
+0.2
-0.4
+0.2
+0.2
stress
Chlorite 0.32 mM
+1.2
+0.7
-1.7
-0.1
+0.0
stress
Tetracycline 0.012 mg/ml
+0.2
+0.3
-0.2
-0.1
+0.0
stress
Nalidixic 0.04 mg/ml
+0.2
+0.3
+0.1
-0.2
+0.1
nitrogen source
L-Isoleucine (N)
+0.3
+0.5
-0.1
-0.0
+0.0
nitrogen source
L-Asparagine (N)
+0.5
+0.1
+0.0
+0.5
-0.3
stress
Tetracycline 0.024 mg/ml
+1.0
+0.6
-0.2
-0.1
-0.1
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