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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS16170 and ABZR86_RS16175 are separated by 345 nucleotides
ABZR86_RS16175 and ABZR86_RS16180 are separated by 477 nucleotides
ABZR86_RS16180 and ABZR86_RS16185 overlap by 1 nucleotides
ABZR86_RS16185 and ABZR86_RS16190 are separated by 115 nucleotides
ABZR86_RS16170: ABZR86_RS16170 - hypothetical protein, at 3,653,252 to 3,653,539
_RS16170
ABZR86_RS16175: ABZR86_RS16175 - hypothetical protein, at 3,653,885 to 3,654,145
_RS16175
ABZR86_RS16180: ABZR86_RS16180 - Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB, at 3,654,623 to 3,655,900
_RS16180
ABZR86_RS16185: ABZR86_RS16185 - NAD-dependent epimerase, at 3,655,900 to 3,656,910
_RS16185
ABZR86_RS16190: ABZR86_RS16190 - hypothetical protein, at 3,657,026 to 3,657,598
_RS16190
Group
Condition
ABZR86
_RS16170
ABZR86
_RS16175
ABZR86
_RS16180
ABZR86
_RS16185
ABZR86
_RS16190
carbon source
D-Fructose (C)
N.D.
N.D.
-0.2
-0.3
-0.3
carbon source
D-Glucose (C)
N.D.
N.D.
-0.0
-0.3
-0.2
carbon source
D-Maltose (C)
N.D.
N.D.
+0.1
-0.3
-0.3
carbon source
D-Fructose (C)
N.D.
N.D.
+0.2
-0.3
-0.4
nitrogen source
L-Lysine (N)
N.D.
N.D.
+0.0
+0.1
-0.6
nitrogen source
L-Arginine (N)
N.D.
N.D.
+0.1
-0.2
-0.3
stress
Thallium(I) acetate 0.016 mg/ml
N.D.
N.D.
+0.2
-0.2
-0.3
carbon source
NAG (C)
N.D.
N.D.
+0.2
-0.1
-0.3
carbon source
a-Cyclodextrin (C)
N.D.
N.D.
+0.1
-0.0
-0.2
carbon source
D-Cellobiose (C)
N.D.
N.D.
+0.1
-0.0
-0.2
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
-0.0
+0.1
-0.2
stress
D-Cycloserine 0.032 mg/ml
N.D.
N.D.
-0.2
-0.1
+0.2
carbon source
D-Galactose (C)
N.D.
N.D.
+0.2
-0.2
-0.1
carbon source
pyruvate (C)
N.D.
N.D.
+0.2
-0.1
-0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
N.D.
+0.1
+0.2
-0.3
carbon source
pyruvate (C)
N.D.
N.D.
+0.2
-0.1
-0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
N.D.
+0.2
+0.1
-0.1
carbon source
D-Glucose (C)
N.D.
N.D.
+0.3
+0.0
-0.1
stress
Zinc 2.5 mM
N.D.
N.D.
-0.1
+0.3
+0.2
stress
nitrate 150 mM
N.D.
N.D.
+0.2
-0.1
+0.2
stress
Paraquat dichloride 0.1 mg/ml
N.D.
N.D.
+0.2
+0.1
+0.1
nitrogen source
Casamino Acids (N)
N.D.
N.D.
+0.3
+0.2
-0.0
stress
Tetracycline 0.024 mg/ml
N.D.
N.D.
-0.0
+0.3
+0.1
stress
Paraquat dichloride 0.05 mg/ml
N.D.
N.D.
+0.1
+0.2
+0.1
lb
LB
N.D.
N.D.
+0.2
+0.2
+0.1
stress
Nalidixic 0.04 mg/ml
N.D.
N.D.
+0.2
+0.2
+0.2
stress
Chloramphenicol 0.008 mg/ml
N.D.
N.D.
+0.5
+0.1
+0.0
lb
LB
N.D.
N.D.
+0.0
+0.4
+0.1
stress
Chloramphenicol 0.012 mg/ml
N.D.
N.D.
+0.4
+0.2
+0.2
nitrogen source
L-Asparagine (N)
N.D.
N.D.
+0.6
+0.2
+0.3
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