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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS15830 and ABZR86_RS15835 are separated by 25 nucleotides
ABZR86_RS15835 and ABZR86_RS15840 are separated by 21 nucleotides
ABZR86_RS15840 and ABZR86_RS15845 are separated by 322 nucleotides
ABZR86_RS15845 and ABZR86_RS15850 are separated by 59 nucleotides
ABZR86_RS15830: ABZR86_RS15830 - sulfurtransferase, at 3,562,894 to 3,563,646
_RS15830
ABZR86_RS15835: ABZR86_RS15835 - 8-amino-7-oxononanoate synthase, at 3,563,672 to 3,564,865
_RS15835
ABZR86_RS15840: ABZR86_RS15840 - biotin synthase BioB, at 3,564,887 to 3,565,933
_RS15840
ABZR86_RS15845: ABZR86_RS15845 - hypothetical protein, at 3,566,256 to 3,566,462
_RS15845
ABZR86_RS15850: ABZR86_RS15850 - hypothetical protein, at 3,566,522 to 3,566,986
_RS15850
Group
Condition
ABZR86
_RS15830
ABZR86
_RS15835
ABZR86
_RS15840
ABZR86
_RS15845
ABZR86
_RS15850
nitrogen source
L-Arginine (N)
-0.1
-0.2
-0.2
N.D.
-0.3
carbon source
pyruvate (C)
+0.0
-0.3
+0.1
N.D.
-0.6
carbon source
D-Fructose (C)
+0.1
-0.3
-0.1
N.D.
-0.3
carbon source
a-Cyclodextrin (C)
+0.2
-0.0
-0.1
N.D.
-0.5
carbon source
D-Cellobiose (C)
+0.3
-0.0
-0.3
N.D.
-0.4
lb
LB
-0.4
+0.2
+0.2
N.D.
-0.3
stress
Paraquat dichloride 0.05 mg/ml
-0.3
+0.1
+0.3
N.D.
-0.3
carbon source
L-Alanine (C)
-0.1
-0.3
+0.2
N.D.
+0.1
carbon source
D-Maltose (C)
+0.1
+0.1
+0.2
N.D.
-0.4
stress
Tetracycline 0.024 mg/ml
-0.4
-0.1
+0.1
N.D.
+0.5
stress
Paraquat dichloride 0.1 mg/ml
-0.2
+0.3
+0.2
N.D.
+0.0
stress
perchlorate 75 mM
+0.4
-0.0
+0.1
N.D.
-0.2
stress
nitrite 6 mM
+0.3
+0.2
+0.1
N.D.
-0.2
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
+0.2
-0.1
N.D.
+0.4
stress
Spectinomycin 0.04 mg/ml
-0.1
+0.2
-0.1
N.D.
+0.4
nitrogen source
L-Isoleucine (N)
-0.1
+0.1
+0.3
N.D.
+0.3
stress
Fusidic 0.2 mg/ml
+0.2
+0.4
+0.2
N.D.
-0.1
nitrogen source
Glucuronamide (N)
+0.1
+0.3
+0.1
N.D.
+0.2
stress
Carbenicillin 0.04 mg/ml
+0.1
-0.0
+0.2
N.D.
+0.3
stress
Chloramphenicol 0.012 mg/ml
-0.0
+0.2
+0.4
N.D.
+0.1
lb
LB
-0.0
+0.7
-0.1
N.D.
+0.1
nitrogen source
L-Lysine (N)
-0.0
+0.3
+0.2
N.D.
+0.2
stress
Ceftazidime 0.1 mg/ml
+0.2
+0.0
+0.3
N.D.
+0.2
nitrogen source
L-Leucine (N)
+0.2
-0.1
+0.2
N.D.
+0.5
lb
LB
+0.0
+0.0
+0.5
N.D.
+0.3
nitrogen source
L-Asparagine (N)
+0.0
+0.2
+0.4
N.D.
+0.4
stress
Nalidixic 0.08 mg/ml
+0.6
+0.3
+0.1
N.D.
+0.1
stress
Sisomicin 0.016 mg/ml
+0.6
+0.0
+0.3
N.D.
+0.4
stress
Fusidic 0.4 mg/ml
+0.9
+0.1
+0.5
N.D.
+0.6
stress
Chlorite 0.32 mM
+0.8
+0.5
+0.9
N.D.
+0.4
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ABZR86_RS15840
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