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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS15470 and ABZR86_RS15475 are separated by 141 nucleotides
ABZR86_RS15475 and ABZR86_RS15480 are separated by 52 nucleotides
ABZR86_RS15480 and ABZR86_RS15485 overlap by 11 nucleotides
ABZR86_RS15485 and ABZR86_RS15490 are separated by 146 nucleotides
ABZR86_RS15470: ABZR86_RS15470 - hypothetical protein, at 3,481,718 to 3,482,341
_RS15470
ABZR86_RS15475: ABZR86_RS15475 - hypothetical protein, at 3,482,483 to 3,482,842
_RS15475
ABZR86_RS15480: ABZR86_RS15480 - hypothetical protein, at 3,482,895 to 3,483,788
_RS15480
ABZR86_RS15485: ABZR86_RS15485 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 3,483,778 to 3,485,991
_RS15485
ABZR86_RS15490: ABZR86_RS15490 - hypothetical protein, at 3,486,138 to 3,486,416
_RS15490
Group
Condition
ABZR86
_RS15470
ABZR86
_RS15475
ABZR86
_RS15480
ABZR86
_RS15485
ABZR86
_RS15490
lb
LB
-0.4
+0.2
-0.0
+0.0
-0.8
stress
Fusidic 0.2 mg/ml
-0.1
-0.1
-0.2
-0.2
-0.0
stress
Tetracycline 0.024 mg/ml
-0.3
+0.1
-0.2
-0.1
-0.1
stress
Carbenicillin 0.02 mg/ml
-0.2
-0.1
+0.1
-0.1
-0.2
stress
Spectinomycin 0.04 mg/ml
-0.1
-0.3
+0.1
+0.0
-0.2
nitrogen source
L-Asparagine (N)
-0.2
-0.2
+0.2
-0.0
-0.1
stress
Zinc 2.5 mM
-0.1
+0.1
-0.0
+0.1
-0.4
carbon source
a-Cyclodextrin (C)
-0.1
-0.3
-0.1
-0.1
+0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.1
-0.1
-0.0
-0.3
+0.3
stress
Nalidixic 0.01 mg/ml
+0.0
+0.1
+0.0
+0.1
-0.4
carbon source
L-Alanine (C)
+0.0
-0.2
-0.2
+0.0
+0.2
stress
Nalidixic 0.08 mg/ml
+0.1
+0.0
+0.2
+0.1
-0.3
stress
Fusidic 0.4 mg/ml
-0.0
+0.2
-0.1
-0.3
+0.2
stress
Chloramphenicol 0.008 mg/ml
+0.1
+0.1
-0.0
+0.2
-0.2
carbon source
a-Cyclodextrin (C)
+0.1
-0.0
+0.0
+0.2
-0.3
lb
LB
-0.1
-0.2
+0.2
-0.0
+0.1
carbon source
pyruvate (C)
+0.1
-0.2
-0.0
+0.0
+0.3
stress
Chloride 250 mM
-0.1
-0.0
+0.1
-0.1
+0.3
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.0
-0.0
-0.2
+0.5
stress
Chlorite 0.32 mM
-0.1
-0.1
-0.0
+0.1
+0.4
stress
A22 0.02 mg/ml
-0.0
+0.0
-0.1
-0.0
+0.4
stress
sodium fluoride 60 mM
-0.1
+0.0
-0.1
-0.0
+0.5
carbon source
L-Alanine (C)
-0.1
-0.3
+0.1
+0.1
+0.5
stress
Thallium(I) acetate 0.016 mg/ml
-0.1
+0.2
+0.1
+0.1
+0.1
nitrogen source
L-Proline (N)
-0.0
+0.2
+0.0
-0.1
+0.3
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.1
-0.0
-0.0
+0.4
stress
nitrite 6 mM
-0.2
+0.1
+0.1
+0.1
+0.2
nitrogen source
L-Lysine (N)
+0.1
-0.1
+0.2
+0.2
+0.1
lb
LB
-0.1
+0.2
-0.0
+0.1
+0.3
carbon source
D-Maltose (C)
+0.1
+0.1
+0.2
-0.0
+0.5
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