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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS15215 and ABZR86_RS15220 are separated by 164 nucleotides
ABZR86_RS15220 and ABZR86_RS15225 are separated by 62 nucleotides
ABZR86_RS15225 and ABZR86_RS15230 are separated by 46 nucleotides
ABZR86_RS15230 and ABZR86_RS15235 are separated by 12 nucleotides
ABZR86_RS15215: ABZR86_RS15215 - hypothetical protein, at 3,427,601 to 3,427,825
_RS15215
ABZR86_RS15220: ABZR86_RS15220 - hypothetical protein, at 3,427,990 to 3,430,209
_RS15220
ABZR86_RS15225: ABZR86_RS15225 - PA0069 family radical SAM protein, at 3,430,272 to 3,431,351
_RS15225
ABZR86_RS15230: ABZR86_RS15230 - PA0069 family radical SAM protein, at 3,431,398 to 3,432,507
_RS15230
ABZR86_RS15235: ABZR86_RS15235 - type II toxin-antitoxin system HipA family toxin YjjJ, at 3,432,520 to 3,433,893
_RS15235
Group
Condition
ABZR86
_RS15215
ABZR86
_RS15220
ABZR86
_RS15225
ABZR86
_RS15230
ABZR86
_RS15235
stress
Chloramphenicol 0.012 mg/ml
N.D.
-0.1
+0.0
+0.1
-0.8
carbon source
pyruvate (C)
N.D.
+0.0
-0.1
-0.0
-0.5
carbon source
NAG (C)
N.D.
+0.0
+0.0
-0.2
-0.4
carbon source
pyruvate (C)
N.D.
-0.1
-0.1
+0.0
-0.4
nitrogen source
L-Lysine (N)
N.D.
-0.1
-0.1
+0.1
-0.5
stress
sodium fluoride 40 mM
N.D.
-0.0
-0.1
+0.2
-0.6
carbon source
D-Fructose (C)
N.D.
+0.2
-0.0
+0.2
-0.7
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
-0.0
+0.2
-0.4
+0.1
stress
Fusidic 0.4 mg/ml
N.D.
+0.0
+0.1
+0.2
-0.5
nitrogen source
L-Asparagine (N)
N.D.
+0.3
-0.2
+0.2
-0.4
stress
A22 0.02 mg/ml
N.D.
-0.1
-0.2
+0.0
+0.3
stress
Chloramphenicol 0.008 mg/ml
N.D.
+0.1
+0.2
+0.1
-0.3
carbon source
D-Glucose (C)
N.D.
+0.2
+0.0
+0.2
-0.2
carbon source
NAG (C)
N.D.
+0.1
+0.1
-0.2
+0.3
carbon source
D-Maltose (C)
N.D.
-0.1
+0.1
+0.1
+0.2
stress
nitrate 150 mM
N.D.
-0.0
-0.1
+0.1
+0.4
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-0.1
-0.0
+0.2
+0.4
stress
Nalidixic 0.04 mg/ml
N.D.
+0.1
+0.2
+0.3
-0.0
stress
sodium fluoride 60 mM
N.D.
+0.2
+0.1
+0.1
+0.2
nitrogen source
nitrate (N)
N.D.
+0.0
-0.2
+0.0
+0.8
stress
Carbenicillin 0.02 mg/ml
N.D.
+0.0
-0.0
+0.0
+0.6
stress
Nalidixic 0.02 mg/ml
N.D.
+0.0
+0.1
+0.1
+0.4
carbon source
D-Galactose (C)
N.D.
+0.0
+0.4
-0.5
+0.7
stress
Nalidixic 0.08 mg/ml
N.D.
+0.2
+0.3
+0.2
-0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.0
+0.2
-0.3
+0.8
lb
LB
N.D.
+0.1
+0.3
-0.3
+0.6
stress
Ceftazidime 0.1 mg/ml
N.D.
+0.1
-0.0
-0.1
+0.8
nitrogen source
L-Arginine (N)
N.D.
+0.0
+0.0
+0.1
+0.7
stress
Chlorite 0.32 mM
N.D.
+0.1
+0.1
-0.1
+0.8
stress
Tetracycline 0.024 mg/ml
N.D.
-0.0
+0.0
+0.1
+0.8
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ABZR86_RS15225
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