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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS15030 and ABZR86_RS15035 are separated by 540 nucleotides
ABZR86_RS15035 and ABZR86_RS15040 are separated by 71 nucleotides
ABZR86_RS15040 and ABZR86_RS15045 are separated by 38 nucleotides
ABZR86_RS15045 and ABZR86_RS15050 are separated by 39 nucleotides
ABZR86_RS15030: ABZR86_RS15030 - TonB-dependent receptor, at 3,377,282 to 3,380,260
_RS15030
ABZR86_RS15035: ABZR86_RS15035 - ATP-dependent protease subunit HslV, at 3,380,801 to 3,381,352
_RS15035
ABZR86_RS15040: ABZR86_RS15040 - ATP-dependent protease ATPase subunit HslU, at 3,381,424 to 3,382,758
_RS15040
ABZR86_RS15045: ABZR86_RS15045 - hypothetical protein, at 3,382,797 to 3,383,414
_RS15045
ABZR86_RS15050: ABZR86_RS15050 - hypothetical protein, at 3,383,454 to 3,383,849
_RS15050
Group
Condition
ABZR86
_RS15030
ABZR86
_RS15035
ABZR86
_RS15040
ABZR86
_RS15045
ABZR86
_RS15050
stress
Sisomicin 0.016 mg/ml
+0.0
-1.1
-1.5
-1.1
-0.0
stress
Spectinomycin 0.04 mg/ml
-0.0
-0.6
-0.2
-1.3
-0.0
stress
sodium fluoride 60 mM
+0.0
-0.9
-0.4
-0.3
-0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.1
+0.1
+0.2
-1.1
-0.3
stress
nitrate 150 mM
-0.1
-0.6
-0.1
-0.4
-0.0
carbon source
D-Glucose (C)
-0.0
-0.2
+0.0
-0.7
-0.2
stress
Zinc 2.5 mM
-0.0
+0.0
-0.3
-0.6
+0.1
carbon source
NAG (C)
-0.0
+0.2
+0.2
-1.0
-0.2
stress
Chlorite 0.32 mM
-0.0
-0.4
-0.0
-0.4
+0.1
carbon source
NAG (C)
-0.0
+0.1
+0.2
-0.8
-0.3
carbon source
D-Cellobiose (C)
-0.0
+0.1
+0.2
-0.7
-0.1
carbon source
D-Glucose (C)
-0.1
+0.3
+0.2
-0.7
-0.2
carbon source
a-Cyclodextrin (C)
-0.0
+0.3
+0.3
-0.9
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.0
+0.3
+0.3
-1.0
-0.1
nitrogen source
L-Leucine (N)
-0.1
+0.1
+0.2
-0.6
-0.1
carbon source
D-Maltose (C)
-0.0
+0.3
+0.2
-0.9
+0.0
nitrogen source
nitrate (N)
-0.1
+0.3
+0.1
-0.5
-0.1
carbon source
D-Fructose (C)
+0.0
+0.2
+0.2
-0.6
-0.1
carbon source
D-Galactose (C)
+0.0
+0.4
+0.4
-0.9
-0.1
carbon source
D-Maltose (C)
+0.0
+0.4
+0.1
-0.7
-0.0
carbon source
a-Cyclodextrin (C)
-0.1
+0.5
+0.2
-0.8
-0.0
stress
sodium fluoride 40 mM
-0.1
+0.4
-0.1
-0.2
-0.1
stress
Tetracycline 0.024 mg/ml
+0.0
-0.2
-0.4
+0.7
+0.0
nitrogen source
Glucuronamide (N)
-0.0
+0.4
+0.3
-0.4
-0.1
stress
Thallium(I) acetate 0.008 mg/ml
+0.0
+0.5
+0.4
-0.5
-0.3
carbon source
L-Alanine (C)
+0.0
+0.8
+0.4
-0.9
-0.2
carbon source
L-Alanine (C)
+0.0
+0.9
+0.3
-0.9
-0.1
lb
LB
+0.1
+0.6
+0.1
-0.3
-0.1
nitrogen source
L-Isoleucine (N)
-0.0
+1.0
+0.5
-0.8
+0.1
stress
Fusidic 0.4 mg/ml
-0.0
-0.0
+0.0
+2.9
-0.1
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