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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS14895 and ABZR86_RS14900 overlap by 4 nucleotides
ABZR86_RS14900 and ABZR86_RS14905 are separated by 16 nucleotides
ABZR86_RS14905 and ABZR86_RS14910 overlap by 4 nucleotides
ABZR86_RS14910 and ABZR86_RS14915 are separated by 4 nucleotides
ABZR86_RS14895: ABZR86_RS14895 - glucoamylase family protein, at 3,347,137 to 3,348,531
_RS14895
ABZR86_RS14900: ABZR86_RS14900 - sugar ABC transporter substrate-binding protein, at 3,348,528 to 3,349,844
_RS14900
ABZR86_RS14905: ABZR86_RS14905 - sugar ABC transporter permease, at 3,349,861 to 3,350,739
_RS14905
ABZR86_RS14910: ABZR86_RS14910 - carbohydrate ABC transporter permease, at 3,350,736 to 3,351,557
_RS14910
ABZR86_RS14915: ABZR86_RS14915 - discoidin domain-containing protein, at 3,351,562 to 3,354,714
_RS14915
Group
Condition
ABZR86
_RS14895
ABZR86
_RS14900
ABZR86
_RS14905
ABZR86
_RS14910
ABZR86
_RS14915
stress
Tetracycline 0.024 mg/ml
-0.2
-0.1
+0.0
-0.1
-0.1
stress
sodium fluoride 60 mM
-0.2
-0.0
+0.1
-0.3
-0.0
carbon source
D-Fructose (C)
+0.1
-0.1
-0.2
-0.2
+0.1
lb
LB
+0.1
+0.2
-0.1
-0.4
-0.2
stress
Chloride 250 mM
-0.1
+0.1
-0.1
-0.1
-0.1
carbon source
L-Alanine (C)
-0.0
-0.2
-0.0
-0.2
+0.1
nitrogen source
L-Isoleucine (N)
-0.1
+0.1
-0.1
-0.1
-0.2
carbon source
D-Cellobiose (C)
+0.1
-0.3
+0.1
-0.2
+0.0
stress
nitrate 200 mM
-0.1
+0.1
-0.2
-0.1
-0.1
nitrogen source
L-Arginine (N)
-0.1
-0.0
-0.2
+0.1
-0.1
carbon source
D-Fructose (C)
+0.1
-0.2
+0.1
-0.3
+0.1
lb
LB
-0.1
+0.1
-0.1
-0.1
-0.1
stress
Paraquat dichloride 0.1 mg/ml
-0.0
-0.1
+0.1
-0.3
+0.0
stress
Ceftazidime 0.05 mg/ml
-0.1
+0.2
-0.2
-0.0
-0.1
nitrogen source
L-Leucine (N)
+0.0
-0.3
-0.0
+0.2
-0.1
carbon source
L-Alanine (C)
+0.0
-0.2
-0.1
+0.1
+0.1
stress
Tetracycline 0.012 mg/ml
+0.0
-0.1
-0.0
+0.2
-0.2
stress
Chloramphenicol 0.008 mg/ml
-0.0
+0.1
+0.1
-0.2
+0.1
stress
Carbenicillin 0.02 mg/ml
-0.0
+0.1
-0.2
+0.1
-0.0
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.2
+0.0
-0.0
-0.2
stress
Chlorite 0.32 mM
+0.0
-0.2
+0.1
-0.1
+0.1
carbon source
pyruvate (C)
-0.1
-0.1
-0.0
+0.2
+0.1
carbon source
a-Cyclodextrin (C)
+0.0
-0.2
+0.2
-0.0
+0.1
carbon source
NAG (C)
+0.1
-0.2
-0.0
+0.2
+0.1
stress
nitrate 150 mM
-0.1
+0.1
+0.2
+0.2
-0.1
carbon source
D-Galactose (C)
+0.0
-0.1
+0.1
+0.2
+0.1
stress
Ceftazidime 0.1 mg/ml
+0.1
+0.1
+0.1
+0.2
-0.1
nitrogen source
nitrate (N)
-0.0
+0.2
+0.1
+0.2
-0.0
stress
Fusidic 0.4 mg/ml
-0.1
+0.2
+0.2
+0.1
+0.0
nitrogen source
L-Asparagine (N)
-0.2
+0.3
+0.2
+0.2
-0.1
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